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The map label for this gene is 218548886

Identifier: 218548886

GI number: 218548886

Start: 1564888

End: 1565364

Strand: Direct

Name: 218548886

Synonym: EFER_1531

Alternate gene names: NA

Gene position: 1564888-1565364 (Clockwise)

Preceding gene: 218548885

Following gene: 218548887

Centisome position: 34.1

GC content: 44.03

Gene sequence:

>477_bases
ATGAAATATTTCCGCAAGACCGAACTTGTCCTTGCTCGTCTTGGTTTAATTGCCATTGTTTTAATTATTTTGTTTGGCGG
CATTAGTCGTAGTATCGGTCATCCGGTAATCTGGTCGCTGGAGATAGCGATGGTACTTTTTGCCTGGGTTAGTATGTTTG
CCATTGATTATGCTTTTCAGACTCGCAGGCATATTGGCATCGATGCACTTACAAATTTATTCCCCCCACACTTACAGCGA
TTGTGCCTTTGGTTTAATGAAATATGTATTCTCGGATTTCTCTTTTGTGGCGTCTGGTACGGTTTTAACTTCACCTGGAC
GACACACAACCAGGTTCTGCCCGTTACTGAAATATCACTTGCCTGGCTGAACAGTGCTGTGCCAACGGGGTGTTTGTTAA
TGGTGGTGACGTCACTGTCATTTATCTTGCAGGGATGTCGGGAGAAAACTGCTGTCGTTCAGGAGGAAACATGTTAA

Upstream 100 bases:

>100_bases
AAAGCTTGGCTTAAGCGAAGCATACAAACAAGTTAATTCAATAATTAATTAAATAATATAAGCAGAGTTTCGGCTCTGCT
TCATTGTTTGGGGTGCATGA

Downstream 100 bases:

>100_bases
TAGCCGTCATTATATTTGTGGTATTACTTTGTATAGGTATGCCTGTAGGAATGGTTATTGCTATCTCCAGCCTGAGTTAT
TTTTTTACCGCCGATTTTTT

Product: TRAP dicarboxylate transporter subunit DctQ

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKYFRKTELVLARLGLIAIVLIILFGGISRSIGHPVIWSLEIAMVLFAWVSMFAIDYAFQTRRHIGIDALTNLFPPHLQR
LCLWFNEICILGFLFCGVWYGFNFTWTTHNQVLPVTEISLAWLNSAVPTGCLLMVVTSLSFILQGCREKTAVVQEETC

Sequences:

>Translated_158_residues
MKYFRKTELVLARLGLIAIVLIILFGGISRSIGHPVIWSLEIAMVLFAWVSMFAIDYAFQTRRHIGIDALTNLFPPHLQR
LCLWFNEICILGFLFCGVWYGFNFTWTTHNQVLPVTEISLAWLNSAVPTGCLLMVVTSLSFILQGCREKTAVVQEETC
>Mature_158_residues
MKYFRKTELVLARLGLIAIVLIILFGGISRSIGHPVIWSLEIAMVLFAWVSMFAIDYAFQTRRHIGIDALTNLFPPHLQR
LCLWFNEICILGFLFCGVWYGFNFTWTTHNQVLPVTEISLAWLNSAVPTGCLLMVVTSLSFILQGCREKTAVVQEETC

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17958; Mature: 17958

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYFRKTELVLARLGLIAIVLIILFGGISRSIGHPVIWSLEIAMVLFAWVSMFAIDYAFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRRHIGIDALTNLFPPHLQRLCLWFNEICILGFLFCGVWYGFNFTWTTHNQVLPVTEISL
HHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH
AWLNSAVPTGCLLMVVTSLSFILQGCREKTAVVQEETC
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYFRKTELVLARLGLIAIVLIILFGGISRSIGHPVIWSLEIAMVLFAWVSMFAIDYAFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRRHIGIDALTNLFPPHLQRLCLWFNEICILGFLFCGVWYGFNFTWTTHNQVLPVTEISL
HHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH
AWLNSAVPTGCLLMVVTSLSFILQGCREKTAVVQEETC
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA