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The map label for this gene is dctP [H]

Identifier: 218548885

GI number: 218548885

Start: 1563862

End: 1564839

Strand: Direct

Name: dctP [H]

Synonym: EFER_1530

Alternate gene names: 218548885

Gene position: 1563862-1564839 (Clockwise)

Preceding gene: 218548884

Following gene: 218548886

Centisome position: 34.08

GC content: 44.89

Gene sequence:

>978_bases
ATGAAGATAAATACAATATCAGCGCTTAGTAAACTGGCTTGTCTTTTACCTTTATTGATGGTTGACGCAAGTTTTGCTGC
TGAGTCTTTAAATGTCAGCACCTCGCTTTCGCCGGATGATCCTATTTATAAAGGCTTACAAAGTTTCAAAAAAGGCGTTG
AAAGCCGTACCAATGGCGAAGTCAAAATTAAGCTCTTTTCCAGCGGTCAGTTAGGCGCAGATAACGAACTCTTACAGCAC
GCGCAGGCAGGAAGCAATGTCGGGGTGGTGGTTGACGGTGCTCGTCTGGCACAGTTTGTGCCAGAGTTTGCCATTATTCC
CGCACCGTTTGTCTTCAAAGACTACACGACGCTGAAAAAATTTATCAGCAGCCCGGTGTTCGCACAATGGAGTGAGCAAA
TGTCCAGCAAGTCCGGGCTGACGCCACTTTCATTTAACTGGTATCAAGGGGCGCGGATGCTGGTTACGCAAAAACCTGTC
AGCAAACCGTCAGATCTTAACGGTGTGCGCGTTCGCGCTTTGGAAGCGCCGGTAACTATTGAAACCATAAAATGTATGGG
AGGCTCTCCGACACCGCTTTCCTGGTCCGAAATCTATTCTTCAATTCAGACCGGGGTCGTGGATGCCGCTGAGGCTCAGC
CGACAGCGGTTTATGGTTCAAAGTTGTATGAAATTACTAAGCACATAACAAAAACCAACCATATTCATTTAATGACCGGA
ATTATTGTTTCACAGAAATGGCTCTCCAGCCTGACAGCGGAACAACAAACCATTTTGCGTGAAGAAGCACAGAAAAATGG
TGATATTGCCTCTGAAAATACCATCCTGGCGGGCGATAAAATGTTAGATGAAATGGCGAAAAAAGGGATGACGATTTCCG
AGGTTGATACTCAACCTTTCATTGATGGATGCCGTTATGTACCTGAAAAGCTTGGCTTAAGCGAAGCATACAAACAAGTT
AATTCAATAATTAATTAA

Upstream 100 bases:

>100_bases
GTCTTTCGCTGTGGCTCCCGGCGCTGTTAGGTATGAAATAAGCGGCCATTAAGTTGAGTCTGAATAATTCGTGTCTAACA
CGTTGTAAAAGGAATTTAGT

Downstream 100 bases:

>100_bases
ATAATATAAGCAGAGTTTCGGCTCTGCTTCATTGTTTGGGGTGCATGAATGAAATATTTCCGCAAGACCGAACTTGTCCT
TGCTCGTCTTGGTTTAATTG

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKINTISALSKLACLLPLLMVDASFAAESLNVSTSLSPDDPIYKGLQSFKKGVESRTNGEVKIKLFSSGQLGADNELLQH
AQAGSNVGVVVDGARLAQFVPEFAIIPAPFVFKDYTTLKKFISSPVFAQWSEQMSSKSGLTPLSFNWYQGARMLVTQKPV
SKPSDLNGVRVRALEAPVTIETIKCMGGSPTPLSWSEIYSSIQTGVVDAAEAQPTAVYGSKLYEITKHITKTNHIHLMTG
IIVSQKWLSSLTAEQQTILREEAQKNGDIASENTILAGDKMLDEMAKKGMTISEVDTQPFIDGCRYVPEKLGLSEAYKQV
NSIIN

Sequences:

>Translated_325_residues
MKINTISALSKLACLLPLLMVDASFAAESLNVSTSLSPDDPIYKGLQSFKKGVESRTNGEVKIKLFSSGQLGADNELLQH
AQAGSNVGVVVDGARLAQFVPEFAIIPAPFVFKDYTTLKKFISSPVFAQWSEQMSSKSGLTPLSFNWYQGARMLVTQKPV
SKPSDLNGVRVRALEAPVTIETIKCMGGSPTPLSWSEIYSSIQTGVVDAAEAQPTAVYGSKLYEITKHITKTNHIHLMTG
IIVSQKWLSSLTAEQQTILREEAQKNGDIASENTILAGDKMLDEMAKKGMTISEVDTQPFIDGCRYVPEKLGLSEAYKQV
NSIIN
>Mature_325_residues
MKINTISALSKLACLLPLLMVDASFAAESLNVSTSLSPDDPIYKGLQSFKKGVESRTNGEVKIKLFSSGQLGADNELLQH
AQAGSNVGVVVDGARLAQFVPEFAIIPAPFVFKDYTTLKKFISSPVFAQWSEQMSSKSGLTPLSFNWYQGARMLVTQKPV
SKPSDLNGVRVRALEAPVTIETIKCMGGSPTPLSWSEIYSSIQTGVVDAAEAQPTAVYGSKLYEITKHITKTNHIHLMTG
IIVSQKWLSSLTAEQQTILREEAQKNGDIASENTILAGDKMLDEMAKKGMTISEVDTQPFIDGCRYVPEKLGLSEAYKQV
NSIIN

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=287, Percent_Identity=26.8292682926829, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35354; Mature: 35354

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINTISALSKLACLLPLLMVDASFAAESLNVSTSLSPDDPIYKGLQSFKKGVESRTNGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE
VKIKLFSSGQLGADNELLQHAQAGSNVGVVVDGARLAQFVPEFAIIPAPFVFKDYTTLKK
EEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHCCHHHCCCCCHHHHHHHHHHH
FISSPVFAQWSEQMSSKSGLTPLSFNWYQGARMLVTQKPVSKPSDLNGVRVRALEAPVTI
HHCCCHHHHHHHHHHHCCCCCCCEECHHCCCEEEEECCCCCCCCCCCCEEEEEECCCEEE
ETIKCMGGSPTPLSWSEIYSSIQTGVVDAAEAQPTAVYGSKLYEITKHITKTNHIHLMTG
EEHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHH
IIVSQKWLSSLTAEQQTILREEAQKNGDIASENTILAGDKMLDEMAKKGMTISEVDTQPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCEEEECCCCHH
IDGCRYVPEKLGLSEAYKQVNSIIN
HHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKINTISALSKLACLLPLLMVDASFAAESLNVSTSLSPDDPIYKGLQSFKKGVESRTNGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE
VKIKLFSSGQLGADNELLQHAQAGSNVGVVVDGARLAQFVPEFAIIPAPFVFKDYTTLKK
EEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHCCHHHCCCCCHHHHHHHHHHH
FISSPVFAQWSEQMSSKSGLTPLSFNWYQGARMLVTQKPVSKPSDLNGVRVRALEAPVTI
HHCCCHHHHHHHHHHHCCCCCCCEECHHCCCEEEEECCCCCCCCCCCCEEEEEECCCEEE
ETIKCMGGSPTPLSWSEIYSSIQTGVVDAAEAQPTAVYGSKLYEITKHITKTNHIHLMTG
EEHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHH
IIVSQKWLSSLTAEQQTILREEAQKNGDIASENTILAGDKMLDEMAKKGMTISEVDTQPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCEEEECCCCHH
IDGCRYVPEKLGLSEAYKQVNSIIN
HHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]