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The map label for this gene is ydiE [H]

Identifier: 218548722

GI number: 218548722

Start: 1393630

End: 1393827

Strand: Reverse

Name: ydiE [H]

Synonym: EFER_1359

Alternate gene names: 218548722

Gene position: 1393827-1393630 (Counterclockwise)

Preceding gene: 218548723

Following gene: 218548708

Centisome position: 30.38

GC content: 44.95

Gene sequence:

>198_bases
ATGATTATGCCTGATATGGATTTTGTCGCCAGAACAGTAGTAAAGGAAAAAGAAAAAAAACTTACCGCCACACCGCCCGT
ACGGCGGATAGCCAGTAAAACGTTGTTGGGCCCGGAAGGTAAAGTCATTATCGATCATGACGGTCAGGAATACCTGCTGC
GTAAAACGCAGGCAGGTAAGTTATTGCTAACAAAGTAG

Upstream 100 bases:

>100_bases
GCCGTTTCTTCTCTCTCCCGACAATCTCCTGAGAATTTGTGCTTGCTGTTACTTGTTGATTTATTGATAATAAAAATCAT
TGTGATACATATTATTATTA

Downstream 100 bases:

>100_bases
TTTAGCTCGAACAACTGACTTCCAGCCGTTTACCCCATTCAGGAGGACGGCGGGAGTAATCATCATCACGATCGTTGAAG
GGATTACGCAATACGTCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MIMPDMDFVARTVVKEKEKKLTATPPVRRIASKTLLGPEGKVIIDHDGQEYLLRKTQAGKLLLTK

Sequences:

>Translated_65_residues
MIMPDMDFVARTVVKEKEKKLTATPPVRRIASKTLLGPEGKVIIDHDGQEYLLRKTQAGKLLLTK
>Mature_65_residues
MIMPDMDFVARTVVKEKEKKLTATPPVRRIASKTLLGPEGKVIIDHDGQEYLLRKTQAGKLLLTK

Specific function: Unknown

COG id: COG4256

COG function: function code P; Hemin uptake protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Y.enterocolitica hemP [H]

Homologues:

Organism=Escherichia coli, GI1787998, Length=45, Percent_Identity=84.4444444444444, Blast_Score=79, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016060
- InterPro:   IPR019600 [H]

Pfam domain/function: PF10636 hemP [H]

EC number: NA

Molecular weight: Translated: 7319; Mature: 7319

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMPDMDFVARTVVKEKEKKLTATPPVRRIASKTLLGPEGKVIIDHDGQEYLLRKTQAGK
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCE
LLLTK
EEECC
>Mature Secondary Structure
MIMPDMDFVARTVVKEKEKKLTATPPVRRIASKTLLGPEGKVIIDHDGQEYLLRKTQAGK
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCE
LLLTK
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]