| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is aroH [H]
Identifier: 218548723
GI number: 218548723
Start: 1393954
End: 1395000
Strand: Reverse
Name: aroH [H]
Synonym: EFER_1360
Alternate gene names: 218548723
Gene position: 1395000-1393954 (Counterclockwise)
Preceding gene: 218548724
Following gene: 218548722
Centisome position: 30.4
GC content: 49.76
Gene sequence:
>1047_bases ATGAACAAAACTGACGAACTCCGCACGGCGCGTATAGACAGTCTGGTAACTCCGGCTGAACTGGCCCAGCGGTATCCCGT GTCCACTGATGTCGCCCGTCATGTTACTGACTCCCGACGACGTATTGAAAAGATATTGAATGGTGAAGATCATCGACTGC TGGTCATAATTGGCCCCTGTTCCATTCATGATCTTGATGCAGCGATGGATTATGCAAAGCGATTGCAAAGTATGCGTAAT CAGTATCAGCATCGACTTGAAATCGTGATGCGCACCTATTTTGAAAAACCACGTACCGTCGTGGGCTGGAAAGGACTCAT TTCCGACCCTGATTTAAACGGCAGTTATCGGGTGAATCATGGTCTGGAGCTGGCCCGGAAATTATTGCTCCAGGTCAATG AACTTGGCGTTCCCACGGCTACTGAATTCCTCGATATGGTGACCGGGCAATTTATTGCCGATCTGATTAGCTGGGGGGCT ATTGGTGCACGGACTACTGAAAGCCAGATCCATCGTGAAATGGCTTCCGCCCTGTCCTGCCCGGTTGGCTTTAAAAATGG CACCGATGGCAATACCCGTATCGCGGTCGATGCTATTCGCGCCTCTCGCGCCAGCCATATGTTCCTGTCACCAGATAAAA ATGGGCAGATGACTATTTACCAGACCAGCGGCAATCCTTACGGTCATATCATTATGCGTGGTGGCAAGAAACCAAACTAC CATGCAGAAGATATTGCTGCTGCCTGTGATACGCTGCACGAGTTCGATCTGCCAGAGCATTTAGTTGTAGATTTCAGCCA CGGCAATTGCCAAAAGCAGCACCGGCGACAGTTGGATGTTTGTGATGATATTTGCCAACAGATACGTAATGGCTCTACCG CCATTGCCGGTATCATGGCGGAAAGTTTTCTGCGTGAAGGCACTCAAAAAATCATCAGCGGTCAGCCACTGGTCTACGGT CAATCTATTACCGACCCTTGCCTTAGCTGGGAAGACTCAGAAATCCTGCTGAGTAAGCTTGCTTCAGCTGTCGATAGCCG CTTCTGA
Upstream 100 bases:
>100_bases AGTCAACAAAGAGACTGTTTGAAGAATTAAATATGTTATCGTGATGCGCATCACTTCCCGGTAGTCCTGCCGTAGAAGCA AAAAATTTTTGAGACTTGCA
Downstream 100 bases:
>100_bases CTGACTGCCCGCTCTTACCTGAGCGGGCCGTTTCTTCTCTCTCCCGACAATCTCCTGAGAATTTGTGCTTGCTGTTACTT GTTGATTTATTGATAATAAA
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNKTDELRTARIDSLVTPAELAQRYPVSTDVARHVTDSRRRIEKILNGEDHRLLVIIGPCSIHDLDAAMDYAKRLQSMRN QYQHRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNY HAEDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLDVCDDICQQIRNGSTAIAGIMAESFLREGTQKIISGQPLVYG QSITDPCLSWEDSEILLSKLASAVDSRF
Sequences:
>Translated_348_residues MNKTDELRTARIDSLVTPAELAQRYPVSTDVARHVTDSRRRIEKILNGEDHRLLVIIGPCSIHDLDAAMDYAKRLQSMRN QYQHRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNY HAEDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLDVCDDICQQIRNGSTAIAGIMAESFLREGTQKIISGQPLVYG QSITDPCLSWEDSEILLSKLASAVDSRF >Mature_348_residues MNKTDELRTARIDSLVTPAELAQRYPVSTDVARHVTDSRRRIEKILNGEDHRLLVIIGPCSIHDLDAAMDYAKRLQSMRN QYQHRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNY HAEDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLDVCDDICQQIRNGSTAIAGIMAESFLREGTQKIISGQPLVYG QSITDPCLSWEDSEILLSKLASAVDSRF
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=348, Percent_Identity=92.2413793103448, Blast_Score=679, Evalue=0.0, Organism=Escherichia coli, GI1786969, Length=345, Percent_Identity=55.9420289855072, Blast_Score=418, Evalue=1e-118, Organism=Escherichia coli, GI1788953, Length=329, Percent_Identity=49.2401215805471, Blast_Score=337, Evalue=5e-94, Organism=Saccharomyces cerevisiae, GI6319726, Length=349, Percent_Identity=47.8510028653295, Blast_Score=327, Evalue=2e-90, Organism=Saccharomyces cerevisiae, GI6320240, Length=353, Percent_Identity=42.4929178470255, Blast_Score=289, Evalue=4e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38861; Mature: 38861
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTDELRTARIDSLVTPAELAQRYPVSTDVARHVTDSRRRIEKILNGEDHRLLVIIGPC CCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC SIHDLDAAMDYAKRLQSMRNQYQHRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECH GLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSC HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNY CCCCCCCCCCCCEEEEEHHHHHCCCCEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCC HAEDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLDVCDDICQQIRNGSTAIAGIMA CHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH ESFLREGTQKIISGQPLVYGQSITDPCLSWEDSEILLSKLASAVDSRF HHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKTDELRTARIDSLVTPAELAQRYPVSTDVARHVTDSRRRIEKILNGEDHRLLVIIGPC CCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC SIHDLDAAMDYAKRLQSMRNQYQHRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECH GLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSC HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC PVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNY CCCCCCCCCCCCEEEEEHHHHHCCCCEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCC HAEDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLDVCDDICQQIRNGSTAIAGIMA CHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH ESFLREGTQKIISGQPLVYGQSITDPCLSWEDSEILLSKLASAVDSRF HHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]