| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is hyaE [H]
Identifier: 218548486
GI number: 218548486
Start: 1157410
End: 1157808
Strand: Direct
Name: hyaE [H]
Synonym: EFER_1114
Alternate gene names: 218548486
Gene position: 1157410-1157808 (Clockwise)
Preceding gene: 218548485
Following gene: 218548487
Centisome position: 25.22
GC content: 55.39
Gene sequence:
>399_bases ATGAGCAACGACACGCCATTTGATGCGTTGTGGCAACGTATGCTGGCGCGCGGCTGGACGCCGATCAGTGAATCCCGTCT TGACGACTGGCTTACGCAAGCGCCAGACGGTGTGGTGTTATTAAGCAGTGACCCGAAACGCACGCCAGAGGTTAGCGATA ATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCTGATTATACATGGCAGGTAGCGATTGCCGACCTTGAGCAAAGC GAAGCCATCGGCGATCGCTTTGGCGTATTTCGTTTTCCCGCCACACTGGTGTTTACCGGTGGTAGCTATCGCGGCGTGCT GAATGGTATTCACCCGTGGGCGGAACTGATAAACCTGATGCGCGGGCTTGTCGAACCGCAACAGGAGCGTGCCTCATGA
Upstream 100 bases:
>100_bases CGGCTAATGAATCGCGCTGTCTCAATTATGACTGTCTGTCGATGGAAAACTACGAAGGCGTTCGCTTGCGCCAGTACCGG ATGACGCTGGAGGAGCAGGA
Downstream 100 bases:
>100_bases GCGAAACTTTTTTCCATCTACTGGGACCCGGAACGCAGCCTGATGATGACAGTTTTAGCATGAATCCACTGCCGATTACC TGTCAGGTGAATGATGAACC
Product: hydrogenase-1 operon protein HyaE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSNDTPFDALWQRMLARGWTPISESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQS EAIGDRFGVFRFPATLVFTGGSYRGVLNGIHPWAELINLMRGLVEPQQERAS
Sequences:
>Translated_132_residues MSNDTPFDALWQRMLARGWTPISESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQS EAIGDRFGVFRFPATLVFTGGSYRGVLNGIHPWAELINLMRGLVEPQQERAS >Mature_131_residues SNDTPFDALWQRMLARGWTPISESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSE AIGDRFGVFRFPATLVFTGGSYRGVLNGIHPWAELINLMRGLVEPQQERAS
Specific function: Not known. Could form, along with hyaD, a complex involved in the processing of the hydrogenase 1 structural operon [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hupG/hyaE family [H]
Homologues:
Organism=Escherichia coli, GI1787210, Length=132, Percent_Identity=98.4848484848485, Blast_Score=267, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010893 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF07449 HyaE [H]
EC number: NA
Molecular weight: Translated: 14877; Mature: 14746
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDTPFDALWQRMLARGWTPISESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGE CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH LLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGSYRGVLNGIHPWAELINLM HHHHCCCCEEEEEECCCHHHHHHHHHCCHHCCCEEEEEECCCCHHHHCCCCHHHHHHHHH RGLVEPQQERAS HHHCCCHHHHCC >Mature Secondary Structure SNDTPFDALWQRMLARGWTPISESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGE CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH LLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGSYRGVLNGIHPWAELINLM HHHHCCCCEEEEEECCCHHHHHHHHHCCHHCCCEEEEEECCCCHHHHCCCCHHHHHHHHH RGLVEPQQERAS HHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2180913; 8905232; 9278503 [H]