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The map label for this gene is ycaQ [H]

Identifier: 218548432

GI number: 218548432

Start: 1096892

End: 1098124

Strand: Direct

Name: ycaQ [H]

Synonym: EFER_1060

Alternate gene names: 218548432

Gene position: 1096892-1098124 (Clockwise)

Preceding gene: 218548431

Following gene: 218548433

Centisome position: 23.9

GC content: 48.58

Gene sequence:

>1233_bases
ATGTCGCTGCAGCACCTTACCCTTACAGATGCCCGTAATCTCCATCTTGCTGCGCAGGGGATGCTAAAAAAACCTCGTCG
TCGTGCGCAACCAGCCGATATTCCAGCGATCATTTCACGCATGTCTTTGCTGCAAATCGACACTATCAATGTTGTTGCTC
GTAGTCCTTATCTGGTGCTTTTCAGCCGCCTTGGTCAGTACCAACCAGAGTGGCTGGATGAATCCCTTCTAAATGGCGAA
CTGATGGAATACTGGGCCCATGAGGCTTGTTTTCTGCCTCGCAGTGATTTTCATTTAATTCGCCACCGCATGCTTATGCC
TGAAAAGATGGGCTGGAAATACAAAGATACCTGGATGAAAGCGCATGTGGCGGAGATTGAGCAATTAATCCAGCATATTC
AGTTGAATGGCCCCGTACGTGCTGCTGATTTTGAACATCCGCAAAAAGGAACGACCGGCTGGTGGGAATGGAAACCGCAT
AAACGCCATCTTGAAGGGCTATTTACAGCAGGCAAAGTCATGGTGGTTGAAAGGCGTAAATTTCAGCGAGTATATGATTT
AACAGATCGCGTTATGCCACATTGGGATGATGAACGTGATCTCCTTTCTCAGGAAGAGGCGGAGCTGCTTATGCTGGACA
ATAGTGCAAGGAGCCTTGGGATTTTCCGGGAACAATGGTTGGCAGACTATTACCGCCTGAAACGCCCAAACATTAAGATG
TGGCGAGAAATAAGAGCAGAACAGCAGCAAATTATCCCGGTGAGTGTCGAGCATTTAGGCCCAATGTGGCTACATGCTGA
AATGCGGCCTCTTCTTGAGTTAGTAGGAGCTGGCAAGCTCGTCGCGACCCATAGTGCGGTCCTTTCCCCCTTTGATCCTG
TCGTTTGGGATCGTAAGAGAGCTGAACAACTTTTTGATTTTAGCTATCGCCTTGAGTGCTACACACCAGCCACGAAACGT
CACTATGGTTATTTCGTGCTACCTTTGCTGCATCGCGGACAACTGGTAGGACGAATGGACGCCAAAATGCATCGCAAGAA
CGGGGTATTGGACGTTATCTCACTGTATTTGCAGGAAGGCGTCAAATCTGGGGCAATATTACAAAAAGGCGTGCATCAGG
CTATTTCTGATTTTGCACGGTGGCAGTTGGCGAATCGCATTACACTCGGAAATTGCCCACGAGATTTGTTCGCTGATTGC
CGTCAGGGTTGGGAAATAGACCCTGCCTCGTAA

Upstream 100 bases:

>100_bases
ATTTGCGGGGCATGAACCAGAGCAACTTCTTGCAAAACTTATTTCGCTGGCTTCAGGTGAATAGTAACGCTGTGGCGGCA
CTTGATTGACGAGGTCATAA

Downstream 100 bases:

>100_bases
TTGAATATGGTAAGATTTGTAAATTCACTTTTCGATCTCCTCCGGAGGAATAATGGATCATCGTCTGCTTGAAATCATCG
CCTGCCCGGTTTGCAACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSLQHLTLTDARNLHLAAQGMLKKPRRRAQPADIPAIISRMSLLQIDTINVVARSPYLVLFSRLGQYQPEWLDESLLNGE
LMEYWAHEACFLPRSDFHLIRHRMLMPEKMGWKYKDTWMKAHVAEIEQLIQHIQLNGPVRAADFEHPQKGTTGWWEWKPH
KRHLEGLFTAGKVMVVERRKFQRVYDLTDRVMPHWDDERDLLSQEEAELLMLDNSARSLGIFREQWLADYYRLKRPNIKM
WREIRAEQQQIIPVSVEHLGPMWLHAEMRPLLELVGAGKLVATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPATKR
HYGYFVLPLLHRGQLVGRMDAKMHRKNGVLDVISLYLQEGVKSGAILQKGVHQAISDFARWQLANRITLGNCPRDLFADC
RQGWEIDPAS

Sequences:

>Translated_410_residues
MSLQHLTLTDARNLHLAAQGMLKKPRRRAQPADIPAIISRMSLLQIDTINVVARSPYLVLFSRLGQYQPEWLDESLLNGE
LMEYWAHEACFLPRSDFHLIRHRMLMPEKMGWKYKDTWMKAHVAEIEQLIQHIQLNGPVRAADFEHPQKGTTGWWEWKPH
KRHLEGLFTAGKVMVVERRKFQRVYDLTDRVMPHWDDERDLLSQEEAELLMLDNSARSLGIFREQWLADYYRLKRPNIKM
WREIRAEQQQIIPVSVEHLGPMWLHAEMRPLLELVGAGKLVATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPATKR
HYGYFVLPLLHRGQLVGRMDAKMHRKNGVLDVISLYLQEGVKSGAILQKGVHQAISDFARWQLANRITLGNCPRDLFADC
RQGWEIDPAS
>Mature_409_residues
SLQHLTLTDARNLHLAAQGMLKKPRRRAQPADIPAIISRMSLLQIDTINVVARSPYLVLFSRLGQYQPEWLDESLLNGEL
MEYWAHEACFLPRSDFHLIRHRMLMPEKMGWKYKDTWMKAHVAEIEQLIQHIQLNGPVRAADFEHPQKGTTGWWEWKPHK
RHLEGLFTAGKVMVVERRKFQRVYDLTDRVMPHWDDERDLLSQEEAELLMLDNSARSLGIFREQWLADYYRLKRPNIKMW
REIRAEQQQIIPVSVEHLGPMWLHAEMRPLLELVGAGKLVATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPATKRH
YGYFVLPLLHRGQLVGRMDAKMHRKNGVLDVISLYLQEGVKSGAILQKGVHQAISDFARWQLANRITLGNCPRDLFADCR
QGWEIDPAS

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=410, Percent_Identity=79.7560975609756, Blast_Score=686, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 47965; Mature: 47834

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQHLTLTDARNLHLAAQGMLKKPRRRAQPADIPAIISRMSLLQIDTINVVARSPYLVL
CCCCEEEECCCCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHEECHHHHHHCCCHHHH
FSRLGQYQPEWLDESLLNGELMEYWAHEACFLPRSDFHLIRHRMLMPEKMGWKYKDTWMK
HHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCHHHHHHH
AHVAEIEQLIQHIQLNGPVRAADFEHPQKGTTGWWEWKPHKRHLEGLFTAGKVMVVERRK
HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEHHHH
FQRVYDLTDRVMPHWDDERDLLSQEEAELLMLDNSARSLGIFREQWLADYYRLKRPNIKM
HHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHH
WREIRAEQQQIIPVSVEHLGPMWLHAEMRPLLELVGAGKLVATHSAVLSPFDPVVWDRKR
HHHHHHHHHHCCEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHCHHH
AEQLFDFSYRLECYTPATKRHYGYFVLPLLHRGQLVGRMDAKMHRKNGVLDVISLYLQEG
HHHHHCCCEEEEEECCHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHC
VKSGAILQKGVHQAISDFARWQLANRITLGNCPRDLFADCRQGWEIDPAS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLQHLTLTDARNLHLAAQGMLKKPRRRAQPADIPAIISRMSLLQIDTINVVARSPYLVL
CCCEEEECCCCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHEECHHHHHHCCCHHHH
FSRLGQYQPEWLDESLLNGELMEYWAHEACFLPRSDFHLIRHRMLMPEKMGWKYKDTWMK
HHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCHHHHHHH
AHVAEIEQLIQHIQLNGPVRAADFEHPQKGTTGWWEWKPHKRHLEGLFTAGKVMVVERRK
HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEHHHH
FQRVYDLTDRVMPHWDDERDLLSQEEAELLMLDNSARSLGIFREQWLADYYRLKRPNIKM
HHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHH
WREIRAEQQQIIPVSVEHLGPMWLHAEMRPLLELVGAGKLVATHSAVLSPFDPVVWDRKR
HHHHHHHHHHCCEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHCHHH
AEQLFDFSYRLECYTPATKRHYGYFVLPLLHRGQLVGRMDAKMHRKNGVLDVISLYLQEG
HHHHHCCCEEEEEECCHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHC
VKSGAILQKGVHQAISDFARWQLANRITLGNCPRDLFADCRQGWEIDPAS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]