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The map label for this gene is ycaR [C]

Identifier: 218548433

GI number: 218548433

Start: 1098177

End: 1098359

Strand: Direct

Name: ycaR [C]

Synonym: EFER_1061

Alternate gene names: 218548433

Gene position: 1098177-1098359 (Clockwise)

Preceding gene: 218548432

Following gene: 218548434

Centisome position: 23.93

GC content: 46.99

Gene sequence:

>183_bases
ATGGATCATCGTCTGCTTGAAATCATCGCCTGCCCGGTTTGCAACGGCAAACTTTGGTATAACCAGGAAAAACAAGAACT
CATATGCAAACTGGATAAACTGGCGTTTCCATTACGTGACGGCATTCCAGTTTTGCTGGAAACAGAAGCTCGGGTACTCA
CCAGCGAGGAGAGCCAATCATGA

Upstream 100 bases:

>100_bases
TTGTTCGCTGATTGCCGTCAGGGTTGGGAAATAGACCCTGCCTCGTAATTGAATATGGTAAGATTTGTAAATTCACTTTT
CGATCTCCTCCGGAGGAATA

Downstream 100 bases:

>100_bases
GTTTCGTGGTGATTATCCCGGCGCGTTTTGCCTCTACTCGCTTGCCAGGTAAACCGCTGCTGGATATCAATGGGAAGCCA
ATGATTGTGCATGTACTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDKLAFPLRDGIPVLLETEARVLTSEESQS

Sequences:

>Translated_60_residues
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDKLAFPLRDGIPVLLETEARVLTSEESQS
>Mature_60_residues
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDKLAFPLRDGIPVLLETEARVLTSEESQS

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=60, Percent_Identity=93.3333333333333, Blast_Score=119, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 6899; Mature: 6899

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDKLAFPLRDGIPVLLETEARVLTSEESQS
CCCHHEEEEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCC
>Mature Secondary Structure
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDKLAFPLRDGIPVLLETEARVLTSEESQS
CCCHHEEEEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA