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The map label for this gene is yahJ [H]

Identifier: 218547834

GI number: 218547834

Start: 433668

End: 435059

Strand: Direct

Name: yahJ [H]

Synonym: EFER_0422

Alternate gene names: 218547834

Gene position: 433668-435059 (Clockwise)

Preceding gene: 218547833

Following gene: 218547839

Centisome position: 9.45

GC content: 55.17

Gene sequence:

>1392_bases
ATGAAAGAAAACAATAGCCGTCGTGAGTTTTTGAGCCAGAGCGGTAAGATGGTCACCGCCGCCGCGCTGTTTGGTACCTC
TGTGCCGCTCGCCCATGCGGCAGTCTCTGGCACAACCCACTGCGACGCAAATAACACCATGAAAATCACTGACCCGCATT
ACTATCTCGATAACGTGTTGCTGGAAACCGGTTTTGACTACGAAAACGGCGTGGCAGTACAGACCCGCACGGCGCGCCAG
ACCGTGGAGATTCAGGACGGTAAAATTGTTGCGCTACATGAGAACAAGCAGCATCCGGACGCCACGCTACCGCACTATGA
CGCTGGCGGTAAACTTATGCTGCCCACTACTCGCGACATGCATATTCATCTCGACAAAACCTTTTACGGCGGACCGTGGC
GCTCACTCAATCGCCCGGCAGGCACCACCATCCAGGACATGATTAAGCTCGAGCAGAAAATGCTGCCGGAACTGCAACCC
TATACTCAGGAGCGGGCAGAAAAACTGATCGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATAT
CGAACCGGTTTCCGGCCTGAAAAATCTGCAAAATTTGCAGGCGGTGCTGGCGCGACGTCAGGCGGGCTTCGAGTGTGAAA
TCGTCGCCTTCCCGCAGCACGGTTTGCTGCTGTCGAAATCGGAACCCTTAATGCGTGAAGCGATGCAGGCAGGGGCGCAT
TACGTCGGCGGGCTGGACCCGACCAGTGTTGATGGCGCGATGGAAAAATCCCTCGACACCATGTTCCAGATTGCGCTGGA
CTACGACAAAGGCGTCGATATTCACCTGCACGAAACCACTCCGGCGGGCGTGGCAGCCATCAATTATATGGTTGAAACAG
TGGAGAAAACGCCGCAGCTAAAAGGCAAGCTGACCATCAGCCACGCCTTTGCGCTGGCTACCCTCAACGAGCAACAGGTA
GATGAACTGGCGAACCGGATGGCGGCGCAGCAAATCTCGATCGCCTCGACGGTGCCGATTGGCACGCTGCATATGCCGCT
TAAACAGTTGCACGACAAAGGCGTAAAAGTGATGACCGGAACTGACAGCGTTATCGACCACTGGTCGCCTTACGGCCTGG
GCGACATGCTGGAAAAAGCCAATCTGTATGCGCAGCTCTATATTCGTCCTAACGAACAGAATTTATCCCGCTCGCTGTTT
TTAGCCACTGGTGATGTATTGCCGCTCAACGAAAAAGGCGAGCGCGTGTGGCCAAAAGCGCAGGATGACGCCAGCTTTGT
GCTGGTGGACGCCTCCTGTTCCGCCGAGGCGGTGGCGCGTATCTCGCCGAGAACGGCAACGTTCCATAAAGGGCAACTGG
TGTGGGGGAGTGTTATCAACAAGGATAGTTAA

Upstream 100 bases:

>100_bases
ACAGGGCGGCAAAGAAGTGATTATCACCACGCCGGAATGCCTGCCCGCGGCGCTGCGTGGCAAGACGGGCACCCATATTA
TTAAAACGTAAGGACGTAAG

Downstream 100 bases:

>100_bases
CATGGCAGAAAATAACGCCTGGCAGAGTTCAGAGCGAACCTCAAAGCTCGCCAGGTGTTATCAGTGTCGAAGTTGCAATG
TTATCTTCTCATTAGCGCAA

Product: deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAAVSGTTHCDANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQ
TVEIQDGKIVALHENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP
YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQV
DELANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLF
LATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVINKDS

Sequences:

>Translated_463_residues
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAAVSGTTHCDANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQ
TVEIQDGKIVALHENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP
YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQV
DELANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLF
LATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVINKDS
>Mature_463_residues
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAAVSGTTHCDANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQ
TVEIQDGKIVALHENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP
YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQV
DELANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLF
LATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVINKDS

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786517, Length=458, Percent_Identity=98.0349344978166, Blast_Score=937, Evalue=0.0,
Organism=Escherichia coli, GI1786531, Length=323, Percent_Identity=26.0061919504644, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50959; Mature: 50959

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAAVSGTTHCDANNTMKITDPHYYLDNVL
CCCCCHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHCCCEEECCCCEEEEECCHHHHHHHH
LETGFDYENGVAVQTRTARQTVEIQDGKIVALHENKQHPDATLPHYDAGGKLMLPTTRDM
HHCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCE
HIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTI
EEEEECEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE
ARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCHHHHHHHHCCCC
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQL
EECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
KGKLTISHAFALATLNEQQVDELANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTG
CCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEC
TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKA
CCHHHHCCCCCCHHHHHHHCCEEEEEEEECCHHCCCEEEEEEECCEEECCCCCCCCCCCC
QDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVINKDS
CCCCCEEEEECCCCCHHHHHCCCCCEEEECCCEEEHHHCCCCC
>Mature Secondary Structure
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAAVSGTTHCDANNTMKITDPHYYLDNVL
CCCCCHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHCCCEEECCCCEEEEECCHHHHHHHH
LETGFDYENGVAVQTRTARQTVEIQDGKIVALHENKQHPDATLPHYDAGGKLMLPTTRDM
HHCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCE
HIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTI
EEEEECEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE
ARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCHHHHHHHHCCCC
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQL
EECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
KGKLTISHAFALATLNEQQVDELANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTG
CCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEC
TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKA
CCHHHHCCCCCCHHHHHHHCCEEEEEEEECCHHCCCEEEEEEECCEEECCCCCCCCCCCC
QDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVINKDS
CCCCCEEEEECCCCCHHHHHCCCCCEEEECCCEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]