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The map label for this gene is ttuB [H]

Identifier: 218547839

GI number: 218547839

Start: 439460

End: 440950

Strand: Direct

Name: ttuB [H]

Synonym: EFER_0429

Alternate gene names: 218547839

Gene position: 439460-440950 (Clockwise)

Preceding gene: 218547834

Following gene: 218547840

Centisome position: 9.58

GC content: 53.12

Gene sequence:

>1491_bases
TTGTCATGTAGCAAAAATGTAAATGGATTACACGAGCAGGAAGGGAATTACGCGTATTCATCATTGCTGGTAAGCCAGCA
AAAACATTTACCTTCTGATCCCACCGGCAACCAGGTTTCCGGAAGGAGAGACACTGTGACTCGTACTCAGCAAAAACCTG
CGACTGAGGTAGAAAAATCCGCGATTCGTAAGATTTCTATCCGTCTCGTCCCCTTTGTTGCTTTGATGTTTTTCATTAAC
TTCCTCGACAGAACGGCGATCTCCTTCGCTGGTCCTAACGGCATGATGCAGGACCTTGGATTGCAGGTGGCACAATTCGG
CCTGGCCTCAGGGATTTTCTTTATTGGCTACATTCTTCTGGAAGTTCCCAGCAACCTGGCGTTGCACCGTTACGGCGCGC
GCCGCTGGCTGGCGCGTATTATGGTTTCCTGGGGAATCGTTTCTCTTTTATTCACCTGGGTGAGCAATGTTGAAGGGCTT
TATATCCTGCGCTTGCTGTTGGGTGTGGCGGAAGCGGGCTTCTTCCCTGGCGCGATATTTTTCCTCAGCGCCTGGGTTCC
GGCGCGTCATCGCAGCAAAATTCTGGCACTGTTTTATCTTGCGCAGCCGCTGACTGTGGTCTTCGGCGCACCGCTGGCGG
CCTGGTTTATCAATCAACACGGTCTGTTCGGCCTTGAAGGCTGGCGCGTCATGTTCCTTGGTGTGTCGATTCCGGCTATC
GTCGTGGGCGTGATTGCGTGGTTCTATCTGATTGATAAACCTAACGATGCCAAATGGCTGACGGCCCTGGAGAAACAGTG
GCTGAACACTGAGCTTGCGCGGGAAGATGCGCAGAAATCCAGTGCCGCCAACCACAGCCTGCGTTCAGTGATGTCCAATG
GTCGCGTCTGGGTACTGTGTCTTATCTACTTCGGTTTTGTTTACGGCCTGTATGCACTGGCGTTTTTCCTGCCAACCATT
ATTGGCGGTTTCCAGAGTCAGTTTAACGTCACCTTTGGCGTGATGGAAAAAGGGCTGATTACTGGCGCGCCGTATCTGGT
GGCGGCGATTGTGATGTACTTCTGGTCGCGTGATGTCACGCGCCGCGGTTGCAAAACCTGGCATATCGCACTACCCGCGT
TGGTCGGCGCAATTTCTGTCCCCACCGCACTTTATATGGACACGCCGTTTGCCACGATGGTCGTTATCTCATTAACCGCC
AGCGCCATTTTTGCCGCACTGCCTAATTTCTGGACCTTACCAACACAGTTCCTCTCAGGGGCGTCTGCCGCCGCAGCTGT
GGCGTTGATCAATACCCTTGGCAACGTGGCCGGTTTTTCGGCGGGCTACATTACCGGTGCGCTGCACGATGTAACGCACA
GTTATCTGGCGCCAATGATGGTGGTGGGGGGATTTATGCTGCTGTCGGCAATTCTGATGCTGGTATTAAGCCGTATTCCC
CATACGTCCAGTGCCGCCGATGTGAAGATGAAACGAGCAGGAGAGCACTAA

Upstream 100 bases:

>100_bases
GCTTTCAGGATTTGAAAGTCGCCAGGAAAGACATTATGAGGGCGATCACATTTTCACTTGTCGAGCATATGCGCAAATCT
TATGAGCTGCTAATGTACAT

Downstream 100 bases:

>100_bases
TATGACATGGCTTTTTAATAATCCCTCCGACTTTGCCAAAGAGATGGTGGCGGGTTTCGTCAGCGCCAATGCTGACATCG
TGCGCCAGGTGCCGGGCGGG

Product: tartrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MSCSKNVNGLHEQEGNYAYSSLLVSQQKHLPSDPTGNQVSGRRDTVTRTQQKPATEVEKSAIRKISIRLVPFVALMFFIN
FLDRTAISFAGPNGMMQDLGLQVAQFGLASGIFFIGYILLEVPSNLALHRYGARRWLARIMVSWGIVSLLFTWVSNVEGL
YILRLLLGVAEAGFFPGAIFFLSAWVPARHRSKILALFYLAQPLTVVFGAPLAAWFINQHGLFGLEGWRVMFLGVSIPAI
VVGVIAWFYLIDKPNDAKWLTALEKQWLNTELAREDAQKSSAANHSLRSVMSNGRVWVLCLIYFGFVYGLYALAFFLPTI
IGGFQSQFNVTFGVMEKGLITGAPYLVAAIVMYFWSRDVTRRGCKTWHIALPALVGAISVPTALYMDTPFATMVVISLTA
SAIFAALPNFWTLPTQFLSGASAAAAVALINTLGNVAGFSAGYITGALHDVTHSYLAPMMVVGGFMLLSAILMLVLSRIP
HTSSAADVKMKRAGEH

Sequences:

>Translated_496_residues
MSCSKNVNGLHEQEGNYAYSSLLVSQQKHLPSDPTGNQVSGRRDTVTRTQQKPATEVEKSAIRKISIRLVPFVALMFFIN
FLDRTAISFAGPNGMMQDLGLQVAQFGLASGIFFIGYILLEVPSNLALHRYGARRWLARIMVSWGIVSLLFTWVSNVEGL
YILRLLLGVAEAGFFPGAIFFLSAWVPARHRSKILALFYLAQPLTVVFGAPLAAWFINQHGLFGLEGWRVMFLGVSIPAI
VVGVIAWFYLIDKPNDAKWLTALEKQWLNTELAREDAQKSSAANHSLRSVMSNGRVWVLCLIYFGFVYGLYALAFFLPTI
IGGFQSQFNVTFGVMEKGLITGAPYLVAAIVMYFWSRDVTRRGCKTWHIALPALVGAISVPTALYMDTPFATMVVISLTA
SAIFAALPNFWTLPTQFLSGASAAAAVALINTLGNVAGFSAGYITGALHDVTHSYLAPMMVVGGFMLLSAILMLVLSRIP
HTSSAADVKMKRAGEH
>Mature_495_residues
SCSKNVNGLHEQEGNYAYSSLLVSQQKHLPSDPTGNQVSGRRDTVTRTQQKPATEVEKSAIRKISIRLVPFVALMFFINF
LDRTAISFAGPNGMMQDLGLQVAQFGLASGIFFIGYILLEVPSNLALHRYGARRWLARIMVSWGIVSLLFTWVSNVEGLY
ILRLLLGVAEAGFFPGAIFFLSAWVPARHRSKILALFYLAQPLTVVFGAPLAAWFINQHGLFGLEGWRVMFLGVSIPAIV
VGVIAWFYLIDKPNDAKWLTALEKQWLNTELAREDAQKSSAANHSLRSVMSNGRVWVLCLIYFGFVYGLYALAFFLPTII
GGFQSQFNVTFGVMEKGLITGAPYLVAAIVMYFWSRDVTRRGCKTWHIALPALVGAISVPTALYMDTPFATMVVISLTAS
AIFAALPNFWTLPTQFLSGASAAAAVALINTLGNVAGFSAGYITGALHDVTHSYLAPMMVVGGFMLLSAILMLVLSRIPH
TSSAADVKMKRAGEH

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI6912666, Length=253, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI87082071, Length=435, Percent_Identity=32.6436781609195, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI2367379, Length=428, Percent_Identity=24.2990654205607, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1789515, Length=447, Percent_Identity=23.489932885906, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789152, Length=457, Percent_Identity=24.72647702407, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI2367193, Length=264, Percent_Identity=22.3484848484848, Blast_Score=63, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322025, Length=240, Percent_Identity=24.1666666666667, Blast_Score=93, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6321698, Length=370, Percent_Identity=22.4324324324324, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6319876, Length=212, Percent_Identity=26.8867924528302, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322612, Length=333, Percent_Identity=22.2222222222222, Blast_Score=77, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6323032, Length=469, Percent_Identity=20.682302771855, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319250, Length=241, Percent_Identity=21.5767634854772, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322973, Length=342, Percent_Identity=20.7602339181287, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641682, Length=275, Percent_Identity=25.0909090909091, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24654215, Length=237, Percent_Identity=23.6286919831224, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19922400, Length=237, Percent_Identity=23.6286919831224, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24583789, Length=354, Percent_Identity=22.8813559322034, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 54322; Mature: 54191

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHCCCCC
>Mature Secondary Structure 
SCSKNVNGLHEQEGNYAYSSLLVSQQKHLPSDPTGNQVSGRRDTVTRTQQKPATEVEKS
CCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHH
AIRKISIRLVPFVALMFFINFLDRTAISFAGPNGMMQDLGLQVAQFGLASGIFFIGYILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EVPSNLALHRYGARRWLARIMVSWGIVSLLFTWVSNVEGLYILRLLLGVAEAGFFPGAIF
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
FLSAWVPARHRSKILALFYLAQPLTVVFGAPLAAWFINQHGLFGLEGWRVMFLGVSIPAI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHH
VVGVIAWFYLIDKPNDAKWLTALEKQWLNTELAREDAQKSSAANHSLRSVMSNGRVWVLC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LIYFGFVYGLYALAFFLPTIIGGFQSQFNVTFGVMEKGLITGAPYLVAAIVMYFWSRDVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
RRGCKTWHIALPALVGAISVPTALYMDTPFATMVVISLTASAIFAALPNFWTLPTQFLSG
HCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC
ASAAAAVALINTLGNVAGFSAGYITGALHDVTHSYLAPMMVVGGFMLLSAILMLVLSRIP
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HTSSAADVKMKRAGEH
CCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]