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The map label for this gene is ygcK [H]

Identifier: 218547721

GI number: 218547721

Start: 322816

End: 323298

Strand: Direct

Name: ygcK [H]

Synonym: EFER_0304

Alternate gene names: 218547721

Gene position: 322816-323298 (Clockwise)

Preceding gene: 218547720

Following gene: 218547722

Centisome position: 7.04

GC content: 47.2

Gene sequence:

>483_bases
ATGGCTGATGAAATTGATGCAATGGCTTTATATCGAGCCTGGCAACAGCTGGATAACGGAGCATGTGCGCAAATTAGACG
TGTTTCAGAACCTGATGATTTACGCGATATCCCTGCGTTTTATCGGTTGGTGCAACCTTTTGGTTGGGAAAAACTGCGTC
ACCAACAGGCTCTTTTGCGCATGGTGTTTTGCCTGAGCGCAGGAAAGAATGTCATCCGACATCAGGATAAAAAACCGGAG
CAAACAACAGGTATCTCGTTGGGAAGAGCTTTAGCCAATAGTGGAAGAATTAACGAGCGCCGTATCTTCCAATTGATTCG
GGCTGACAGAACAGCCGATATGGTCCAGTTACGTCGATTGCTTGCTCACGCCGAACCCGTACTTGACTGGTCATTAATGG
CCAGGATGTTGACCTGGTGGGGAAAGCGCGAACGCCAGCAACTTCTGGAAGATTTTGTATTGACCACAAACAAAAATGCG
TAA

Upstream 100 bases:

>100_bases
CCCTATGCACATCATCCTAAATTAATAAGCACATTAGCACTCGCCCGCGCCACGCTATACAAACATTTACGGGAGTTAAA
ACCGCAAGGAGGGCCATCAA

Downstream 100 bases:

>100_bases
GGAAACCTCTCAATGTCTAATTTTATTAATATCCATGTCCTGATCTCTCACAGCCCTTCATGTCTGAACCGCGACGATAT
GAACATGCAGAAAGACGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDDLRDIPAFYRLVQPFGWEKLRHQQALLRMVFCLSAGKNVIRHQDKKPE
QTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLAHAEPVLDWSLMARMLTWWGKRERQQLLEDFVLTTNKNA

Sequences:

>Translated_160_residues
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDDLRDIPAFYRLVQPFGWEKLRHQQALLRMVFCLSAGKNVIRHQDKKPE
QTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLAHAEPVLDWSLMARMLTWWGKRERQQLLEDFVLTTNKNA
>Mature_159_residues
ADEIDAMALYRAWQQLDNGACAQIRRVSEPDDLRDIPAFYRLVQPFGWEKLRHQQALLRMVFCLSAGKNVIRHQDKKPEQ
TTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLAHAEPVLDWSLMARMLTWWGKRERQQLLEDFVLTTNKNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789117, Length=160, Percent_Identity=95.625, Blast_Score=315, Evalue=9e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013382 [H]

Pfam domain/function: PF09485 CRISPR_Cse2 [H]

EC number: NA

Molecular weight: Translated: 18672; Mature: 18541

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDDLRDIPAFYRLVQPFGWEKLRHQQALLR
CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
MVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRL
HHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
LAHAEPVLDWSLMARMLTWWGKRERQQLLEDFVLTTNKNA
HHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADEIDAMALYRAWQQLDNGACAQIRRVSEPDDLRDIPAFYRLVQPFGWEKLRHQQALLR
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
MVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRL
HHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
LAHAEPVLDWSLMARMLTWWGKRERQQLLEDFVLTTNKNA
HHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]