Click here to switch to the map view.

The map label for this gene is ygcJ [H]

Identifier: 218547722

GI number: 218547722

Start: 323311

End: 324402

Strand: Direct

Name: ygcJ [H]

Synonym: EFER_0305

Alternate gene names: 218547722

Gene position: 323311-324402 (Clockwise)

Preceding gene: 218547721

Following gene: 218547723

Centisome position: 7.05

GC content: 43.32

Gene sequence:

>1092_bases
ATGTCTAATTTTATTAATATCCATGTCCTGATCTCTCACAGCCCTTCATGTCTGAACCGCGACGATATGAACATGCAGAA
AGACGCTATTTTCGGCGGGAAAAGGCGAGTAAGAATTTCAAGTCAAAGCCTTAAACGTGCGATGCGTAAAAGTGATTATT
ACGCACAAAATATTGGTGAATCCAGTCTCAGAACAATTCATCTTGCACAATTACGTGATGTTCTTCGGCAAAAACTTGGT
GAACGTTTTGAGCAAAAAATCATCGATAAGACATTAGCTCTGCTCTCCGGTAAATCAGTTGATGAAGCCGAAAAGATTTC
TGCCGATGCGGTTACTCCCTGGGTTGTGGGAGAAATAGCCTGGTTCTGTGAGCAGGTTGCAAAAGCAGAGGCTGATAATC
TGGATGATAAAAAGCTGCTCAAAATTCTTAAGGAAGATATTGCCGCCATCCGTGTGAATTTACAGCAGGGTGTTGATATT
GCGCTTAGCGGAAGAATGGCAACCAGCGGCATGATGAGTGAGTTGGGAAAAGTTGATGGTGCAATGTCCATTGCGCATGC
GATCACTACTCATCAGGTTGATTCAGATATTGACTGGTTCACCGCTGTAGATGATTTACAGGAACAAGGTTCTGCACATC
TGGGAACTCAGGAATTTTCATCGGGTGTTTTTTATCGTTACGCCAACATTAACCTCGCTCAACTTCAGGAAAATTTAGGT
GGTGCCTCCAGGGAGCAGGCTCTGGAAATTGCAACCAATGTTGTTCATATGCTGGCAACAGAGGTCCCTGGAGCAAAACA
GCGTACTTATGCCGCTTTTAACCCTGCGGATATGGTAATGGTTAATTTCTCCGATATGCCACTTTCTATGGCAAATGCTT
TTGAAAAAGCTGTTAAAGCGAAAGATGGCTTTTTGCAACCGTCTATACAGGCGTTTAATCAATATTGGGATCGCGTTGCC
AATGGATATGGTCTGAACGGAGCTGCTGCGCAATTCAGCTTATCTGATGTAGACCCAATTACTGCTCAAGTTAAACAAAT
GCCTACTTTAGAACAGTTAAAATCCTGGGTTCGTAATAATGGCGAGGCGTGA

Upstream 100 bases:

>100_bases
AATGGCCAGGATGTTGACCTGGTGGGGAAAGCGCGAACGCCAGCAACTTCTGGAAGATTTTGTATTGACCACAAACAAAA
ATGCGTAAGGAAACCTCTCA

Downstream 100 bases:

>100_bases
ACATGAGATCTTATTTGATCTTGCGGCTTGCTGGGCCAATGCAAGCCTGGGGGCTGCCGACCTTTGAAGGAACGCGACCT
ACCGGAAGATTTCCGACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLG
ERFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKILKEDIAAIRVNLQQGVDI
ALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLG
GASREQALEIATNVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVA
NGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA

Sequences:

>Translated_363_residues
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLG
ERFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKILKEDIAAIRVNLQQGVDI
ALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLG
GASREQALEIATNVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVA
NGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA
>Mature_362_residues
SNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLGE
RFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKILKEDIAAIRVNLQQGVDIA
LSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGG
ASREQALEIATNVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVAN
GYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=363, Percent_Identity=98.6225895316804, Blast_Score=743, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 40075; Mature: 39944

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGE
CCCEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCH
SSLRTIHLAQLRDVLRQKLGERFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHH
WFCEQVAKAEADNLDDKKLLKILKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
AMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHC
GASREQALEIATNVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
KDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNN
HCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCHHHHHHHHCCCHHHHHHHHHCC
GEA
CCC
>Mature Secondary Structure 
SNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGE
CCEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCH
SSLRTIHLAQLRDVLRQKLGERFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHH
WFCEQVAKAEADNLDDKKLLKILKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
AMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHC
GASREQALEIATNVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
KDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNN
HCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCHHHHHHHHCCCHHHHHHHHHCC
GEA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]