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The map label for this gene is ygcL [H]

Identifier: 218547720

GI number: 218547720

Start: 321315

End: 322823

Strand: Direct

Name: ygcL [H]

Synonym: EFER_0303

Alternate gene names: 218547720

Gene position: 321315-322823 (Clockwise)

Preceding gene: 218547719

Following gene: 218547721

Centisome position: 7.0

GC content: 43.87

Gene sequence:

>1509_bases
ATGAATTTGCTTATTGATAACTGGATCCCTGTACGCCCGCGAAACGGGGGGAAAGTCCAAATCCTAAATCTGCAATCGCT
ATACTGCAGTAGAGATCAGTGGCGGTTAAGTTTGCCCCGTGACGATATGGAACTGGCCGCTTTAGCACTGCTGGTTTGCA
TTGGGCAAATTATCGCCCCGGCAAAAGATGACGTTGAATTTCGACATCGCATAATGAATCCGCTCACTGAAGATGAGTTT
CAACGACTCATCGCGCCGTGGATAGATATGTTCTACCTTAATCACGCAGAACATCCCTTTATGCAGACCAAAGGTGTCAA
AGCAAATGATGTGACTCCAATGGAAAAACTATTGGCAGGGGTAAGCGGCGCGACGAATTGTGCATTTGTCAATCAACCGG
GGCAGGGTGAAGCATTATGTGGTGGATGCACTGCGATTGCGTTATTCAACCAGGCGAATCAGGCACCTGGTTTTGGTGGT
GGCTTTAAAAGCGGTTTACGTGGAGGAACACCTATAACCACCTTCGTATGTGGGATCGATCTTCGCTCGACGGTGTTACT
CAATGTCCTCACAATACCTCGTCTTCAAAAACAATTTCCCAATGAATCAAATACGGAAAACCAACCTACCTGGATTAAGC
CTGTCAAGCCCAATGAATCTGTGCCAGCTTCGTCAATTGGGTTTGTCCGTGGCTTATTCTGGCAACCAGCACATATTGAA
TTATGCGATCCCATTGGGATTGGTAAATGTTCTTGCTGTGGACAGGAAAGCAATTTGCGTTATACAGGTTTTCTTAAGGA
AAAATTTACCTTTACAGTTAATGGGCTATGGCCCCATCCGCATTCCCCTTGTCTGGTAACAGTCAAGAAAGGGGAGGTTG
AGGAAAAATTTCTTGCTTTCACCACCTCCGCACCATCATGGACGCAAATCAGCCGAGTTGTGGTAGATAAGATTATTCAA
AATGAAAATGGAAATCGCGTGGCGGCGGTTGTGAATCAATTCAGAAATATTGCGCCGCAAAGTCCTCTTGAATTGATTAT
GGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGACGTCATGATATGCTGATGTTTAATCAGGGGTGGCAACAAT
ACGGCAATGTTATAAACGAAATAGTGACTGTTGGTTTGGGGTATAAAACAGCCTTACGCAAGGCGTTATATACTTTTGTG
GAAGGTATTAAAAATAAAGACTTTAAAGGGGCTGGAGTCTCTGTTCATGAGACTGCAGAAAGGCATTTCTATCGACAGAG
TGAATTATTAATTCCCGATGTATTGGCGAATGTTAATTTTTCCCAGGCTGATGAGGTAATAGCTGATTTACGAGACAAAC
TTCATCAATTGTGTGAAATGCTATTTAATCAATCTGTAGCTCCCTATGCACATCATCCTAAATTAATAAGCACATTAGCA
CTCGCCCGCGCCACGCTATACAAACATTTACGGGAGTTAAAACCGCAAGGAGGGCCATCAAATGGCTGA

Upstream 100 bases:

>100_bases
AATTAATTACGTCGTATTTTTTCTTTGTTTTTACCGATAACGGAAGTGTGCCGACGTATAGAAATGCAGGAGAAATGTCG
GAGCATATGAAGGAGAACAA

Downstream 100 bases:

>100_bases
TGAAATTGATGCAATGGCTTTATATCGAGCCTGGCAACAGCTGGATAACGGAGCATGTGCGCAAATTAGACGTGTTTCAG
AACCTGATGATTTACGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MNLLIDNWIPVRPRNGGKVQILNLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEF
QRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGG
GFKSGLRGGTPITTFVCGIDLRSTVLLNVLTIPRLQKQFPNESNTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQ
NENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDMLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFV
EGIKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
LARATLYKHLRELKPQGGPSNG

Sequences:

>Translated_502_residues
MNLLIDNWIPVRPRNGGKVQILNLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEF
QRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGG
GFKSGLRGGTPITTFVCGIDLRSTVLLNVLTIPRLQKQFPNESNTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQ
NENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDMLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFV
EGIKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
LARATLYKHLRELKPQGGPSNG
>Mature_502_residues
MNLLIDNWIPVRPRNGGKVQILNLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEF
QRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGG
GFKSGLRGGTPITTFVCGIDLRSTVLLNVLTIPRLQKQFPNESNTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQ
NENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDMLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFV
EGIKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
LARATLYKHLRELKPQGGPSNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789118, Length=502, Percent_Identity=97.609561752988, Blast_Score=1026, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013381 [H]

Pfam domain/function: PF09481 CRISPR_Cse1 [H]

EC number: NA

Molecular weight: Translated: 55876; Mature: 55876

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLIDNWIPVRPRNGGKVQILNLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAP
CCEEECCEEECCCCCCCEEEEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCC
AKDDVEFRHRIMNPLTEDEFQRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHC
VSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVCGID
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHEEECCC
LRSTVLLNVLTIPRLQKQFPNESNTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAF
EECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHEEE
TTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILER
ECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHH
RHDMLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFVEGIKNKDFKGAGVSVHETAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LARATLYKHLRELKPQGGPSNG
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNLLIDNWIPVRPRNGGKVQILNLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAP
CCEEECCEEECCCCCCCEEEEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCC
AKDDVEFRHRIMNPLTEDEFQRLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHC
VSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVCGID
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHEEECCC
LRSTVLLNVLTIPRLQKQFPNESNTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
LCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAF
EECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHEEE
TTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILER
ECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHH
RHDMLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFVEGIKNKDFKGAGVSVHETAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLA
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LARATLYKHLRELKPQGGPSNG
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]