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The map label for this gene is visC [C]

Identifier: 218532157

GI number: 218532157

Start: 4507370

End: 4508605

Strand: Reverse

Name: visC [C]

Synonym: Mchl_4269

Alternate gene names: 218532157

Gene position: 4508605-4507370 (Counterclockwise)

Preceding gene: 218532162

Following gene: 218532155

Centisome position: 78.03

GC content: 75.32

Gene sequence:

>1236_bases
GTGACGGTCCCGGTGCAGACGTCCCCCGCCCGCCCCTCCGCCGCGCCGCCGCGTTTCACCGTGGCGGTGGTGGGCGCCGG
GGCGGCAGGCCTTGCCGCCGCCCTGGCGCTCGCCCGCGACGGGGTGGAGACCGCGCTCGTCGGGCGTCACGCGCCGGTGG
CGGACGGGCGCACCGTGGCCCTGCTCGACGGCTCGGTGCGGTTCCTGAGGGTGCTCGGCGCATGGGACGAGATCGCCCCG
CATGCGAGCCCGCTCGCCGAACTTCAGATCGTCGACGACACCGGCAGCCTGTTCCGGCCGCCGCCCGCCCGCTTCTCGGC
CGCGGAGATCGGCCTCGACGCCTTCGGCTGGAACGTCGAGAGCGCCCGCCTCGTCGAGACCCTGCGGCGTCAGGCCCGCA
CCACGCCGGGCCTGACCCTGTTCGAGGCGGATTCGGCCGGCATGCGTCTTGAGCAAGACGCCGCGGTGCTAGATCTGGAG
GATGGGCGCAGCCTCGCGGCGCAGCTCGTCGTGGGCGCCGATGGGGGCCGCTCGCCGCTTCGGGCGGCGTCTGCCTTGCG
CACCCGCGAATGGTCCTACCCGCAGGCGGCGCTCACCACCCTGCTCGCCCACGAGCGGCCCCACCGCGACATCTCCACCG
AGTTCCACACCCGCAACGGACCCTTCACCCTGGTGCCGCTCCCCGGCGGCCACCGCTCCAGCCTCGTCTGGGTCACGGCG
GAGCCGGCGGCCAAGCGCCTCTCGGGGCTCGACGACCGGGATCTCGCCGCGGCGGTGGAGCATCAGGCCCGCTCGATGCT
CGGCGCCATGCGGATCGACGGCCCGCGCGGCCTCGTGCCAATGCGCGGCCTCTCGGTGGAGCGACCGGTGGCCGACCGCC
TCGCCCTGATTGGCGAGGCCGCCCACGTCTTCCCGCCGATCGGGGCACAGGGGCTCAATCTCGGCCTGCGCGATGCGGCG
GCCGTGCGGGATGCGGTGTTCTCCGCCCGCGAGGCGAACCGCGATCCGGGCGCGCCCGCTTCGCTCGCGGGGTTCGGACG
CAACCGGGGCGTCGATGCGCGCCTGCGCGGGGCGGCGGTGGACATGCTCAACCGCTCGCTGCTCACCGATTTCCTGCCCG
TCGATGCCCTGCGGGGCCTCGGCCTCGTGGTGCTCGGCGCGATCCCGCCTCTGCGGCGCATCGTCATGCGCGAGGGCGTG
CAGCCGCGGCTCGGCGCGCCGAGCCTGATGCGCTGA

Upstream 100 bases:

>100_bases
AGCCGCACTTGACCCCAGGCCGGCCGCACCTCTGTAGGAAGTCGGTCTTCGATCCTCGTTTTGAGGGCCCTTCCGAGAGC
CCTTCAAGGAGTCTCCCGTC

Downstream 100 bases:

>100_bases
TTCATTTCGGAGTTTCGGGGTGGGCGCGGGACGCGCGCCCAACGCCCCAAAAAATTACAAAATATCGCCGTAGAGATCGA
CCGTCTCGAAGCCGCGCGGG

Product: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTVPVQTSPARPSAAPPRFTVAVVGAGAAGLAAALALARDGVETALVGRHAPVADGRTVALLDGSVRFLRVLGAWDEIAP
HASPLAELQIVDDTGSLFRPPPARFSAAEIGLDAFGWNVESARLVETLRRQARTTPGLTLFEADSAGMRLEQDAAVLDLE
DGRSLAAQLVVGADGGRSPLRAASALRTREWSYPQAALTTLLAHERPHRDISTEFHTRNGPFTLVPLPGGHRSSLVWVTA
EPAAKRLSGLDDRDLAAAVEHQARSMLGAMRIDGPRGLVPMRGLSVERPVADRLALIGEAAHVFPPIGAQGLNLGLRDAA
AVRDAVFSAREANRDPGAPASLAGFGRNRGVDARLRGAAVDMLNRSLLTDFLPVDALRGLGLVVLGAIPPLRRIVMREGV
QPRLGAPSLMR

Sequences:

>Translated_411_residues
MTVPVQTSPARPSAAPPRFTVAVVGAGAAGLAAALALARDGVETALVGRHAPVADGRTVALLDGSVRFLRVLGAWDEIAP
HASPLAELQIVDDTGSLFRPPPARFSAAEIGLDAFGWNVESARLVETLRRQARTTPGLTLFEADSAGMRLEQDAAVLDLE
DGRSLAAQLVVGADGGRSPLRAASALRTREWSYPQAALTTLLAHERPHRDISTEFHTRNGPFTLVPLPGGHRSSLVWVTA
EPAAKRLSGLDDRDLAAAVEHQARSMLGAMRIDGPRGLVPMRGLSVERPVADRLALIGEAAHVFPPIGAQGLNLGLRDAA
AVRDAVFSAREANRDPGAPASLAGFGRNRGVDARLRGAAVDMLNRSLLTDFLPVDALRGLGLVVLGAIPPLRRIVMREGV
QPRLGAPSLMR
>Mature_410_residues
TVPVQTSPARPSAAPPRFTVAVVGAGAAGLAAALALARDGVETALVGRHAPVADGRTVALLDGSVRFLRVLGAWDEIAPH
ASPLAELQIVDDTGSLFRPPPARFSAAEIGLDAFGWNVESARLVETLRRQARTTPGLTLFEADSAGMRLEQDAAVLDLED
GRSLAAQLVVGADGGRSPLRAASALRTREWSYPQAALTTLLAHERPHRDISTEFHTRNGPFTLVPLPGGHRSSLVWVTAE
PAAKRLSGLDDRDLAAAVEHQARSMLGAMRIDGPRGLVPMRGLSVERPVADRLALIGEAAHVFPPIGAQGLNLGLRDAAA
VRDAVFSAREANRDPGAPASLAGFGRNRGVDARLRGAAVDMLNRSLLTDFLPVDALRGLGLVVLGAIPPLRRIVMREGVQ
PRLGAPSLMR

Specific function: Not Yet Known. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=386, Percent_Identity=25.9067357512953, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI32967307, Length=330, Percent_Identity=26.6666666666667, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI1789273, Length=389, Percent_Identity=27.2493573264781, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1789274, Length=387, Percent_Identity=27.1317829457364, Blast_Score=125, Evalue=7e-30,
Organism=Escherichia coli, GI1786883, Length=372, Percent_Identity=28.2258064516129, Blast_Score=123, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6321694, Length=293, Percent_Identity=24.5733788395904, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43311; Mature: 43180

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPVQTSPARPSAAPPRFTVAVVGAGAAGLAAALALARDGVETALVGRHAPVADGRTVA
CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEE
LLDGSVRFLRVLGAWDEIAPHASPLAELQIVDDTGSLFRPPPARFSAAEIGLDAFGWNVE
EECCCHHHHHHHHCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCHHHCCCCC
SARLVETLRRQARTTPGLTLFEADSAGMRLEQDAAVLDLEDGRSLAAQLVVGADGGRSPL
HHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCEEEECCCCCCEEEEEEEECCCCCCHH
RAASALRTREWSYPQAALTTLLAHERPHRDISTEFHTRNGPFTLVPLPGGHRSSLVWVTA
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCCCCCCEEEEEC
EPAAKRLSGLDDRDLAAAVEHQARSMLGAMRIDGPRGLVPMRGLSVERPVADRLALIGEA
CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
AHVFPPIGAQGLNLGLRDAAAVRDAVFSAREANRDPGAPASLAGFGRNRGVDARLRGAAV
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHH
DMLNRSLLTDFLPVDALRGLGLVVLGAIPPLRRIVMREGVQPRLGAPSLMR
HHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVPVQTSPARPSAAPPRFTVAVVGAGAAGLAAALALARDGVETALVGRHAPVADGRTVA
CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEE
LLDGSVRFLRVLGAWDEIAPHASPLAELQIVDDTGSLFRPPPARFSAAEIGLDAFGWNVE
EECCCHHHHHHHHCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCHHHCCCCC
SARLVETLRRQARTTPGLTLFEADSAGMRLEQDAAVLDLEDGRSLAAQLVVGADGGRSPL
HHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCEEEECCCCCCEEEEEEEECCCCCCHH
RAASALRTREWSYPQAALTTLLAHERPHRDISTEFHTRNGPFTLVPLPGGHRSSLVWVTA
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCCCCCCEEEEEC
EPAAKRLSGLDDRDLAAAVEHQARSMLGAMRIDGPRGLVPMRGLSVERPVADRLALIGEA
CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
AHVFPPIGAQGLNLGLRDAAAVRDAVFSAREANRDPGAPASLAGFGRNRGVDARLRGAAV
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHH
DMLNRSLLTDFLPVDALRGLGLVVLGAIPPLRRIVMREGVQPRLGAPSLMR
HHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]