Definition Methylobacterium chloromethanicum CM4, complete genome.
Accession NC_011757
Length 5,777,908

Click here to switch to the map view.

The map label for this gene is acm [H]

Identifier: 218532155

GI number: 218532155

Start: 4505815

End: 4506666

Strand: Reverse

Name: acm [H]

Synonym: Mchl_4267

Alternate gene names: 218532155

Gene position: 4506666-4505815 (Counterclockwise)

Preceding gene: 218532157

Following gene: 218532154

Centisome position: 78.0

GC content: 68.54

Gene sequence:

>852_bases
ATGTCGCTGGACACCGAAATTTCCTCGAGGCTCGCACCGGCTCCGCGCGGATGGCTCAAGCGCGGGCTCGCCGCGCTGAT
GCTCTCCGGGCTCGCGGCCTGCGCCGCGCAGAACGACTTCTACCCCACCAAGGGCGATGCCAAGCCCCATCCCGGCGTCG
CGCGGGCCAAGGGCCACCCGATCCAGGGCATCGACATCTCGAAATGGCAGGGGCCGATCAACTGGGCCTCGGTCAAGAGC
GCGGGCACGCAGTTCGCCTACATCAAGGCGACGGAGGGCGGCGACCACGTCGACGAGCGCTTCCTCGAGAACTGGGACGG
CGCGGGCCGCGCCGGCGTGCCGCGGGGCGCCTACCACTTCGTGTTCTGGTGCCGCTCGGCCGAGGACCAGATGGCGTGGT
TCAAGCGCAACGTGCCGAACGACCCGACCGCCCTGCCCCCGGTGCTCGACGTGGAGTGGAACGGCCACTCGGCGAAGTGC
CCGAAGAAGCTGCCCAAGGCCCAGGCCCTGTCGATGATCCGCTACATGCTGGACGAGATGGAGGCCTATACCGGCAAGCG
GCCGATCATCTACACGGACATCACCTTCCACAAGGACGTGCTGGAAGACGAGCTGCCCGACTATCCCCACTGGGTCCGCT
CCACGGCGGCCGAGCCTGAGCAGCGCTACGCCAACCGCAAGTGGATGCTCTGGCAGTTCACCTCGACCGGGCGCGTGCCC
GGCGTGCGCGGCGACGTCGATCGCAACGCCTTCTACGGCAGCCCGACCGAGTGGGCCTCGTTCCTCGCCACCGATTGCGA
CCCGCGGGAGCATCGGCGTCTGTCGAGCCAGGGCCTCTGCACCGGCAAGTAA

Upstream 100 bases:

>100_bases
GCCTTCCGGAAATCCGCCGCAATGCCAGCAAAGTTCTGTTAACCGGATCAAGGGCATCGAATACCCATTGAAGTCGCACG
CAAGAAGTGGCGGGCCGTCG

Downstream 100 bases:

>100_bases
GCCGGCAAGTAGGCGAGTAAGCGGGGAACGGAGGGAGCCGCCGGTCGCGGCTTCCGTCCGCAGATCAACGCATCCTCTGT
GGTGTGACCGTTCTTCGCGC

Product: glycoside hydrolase family 25

Products: NA

Alternate protein names: 1,4-beta-N-acetylmuramidase M1 [H]

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSLDTEISSRLAPAPRGWLKRGLAALMLSGLAACAAQNDFYPTKGDAKPHPGVARAKGHPIQGIDISKWQGPINWASVKS
AGTQFAYIKATEGGDHVDERFLENWDGAGRAGVPRGAYHFVFWCRSAEDQMAWFKRNVPNDPTALPPVLDVEWNGHSAKC
PKKLPKAQALSMIRYMLDEMEAYTGKRPIIYTDITFHKDVLEDELPDYPHWVRSTAAEPEQRYANRKWMLWQFTSTGRVP
GVRGDVDRNAFYGSPTEWASFLATDCDPREHRRLSSQGLCTGK

Sequences:

>Translated_283_residues
MSLDTEISSRLAPAPRGWLKRGLAALMLSGLAACAAQNDFYPTKGDAKPHPGVARAKGHPIQGIDISKWQGPINWASVKS
AGTQFAYIKATEGGDHVDERFLENWDGAGRAGVPRGAYHFVFWCRSAEDQMAWFKRNVPNDPTALPPVLDVEWNGHSAKC
PKKLPKAQALSMIRYMLDEMEAYTGKRPIIYTDITFHKDVLEDELPDYPHWVRSTAAEPEQRYANRKWMLWQFTSTGRVP
GVRGDVDRNAFYGSPTEWASFLATDCDPREHRRLSSQGLCTGK
>Mature_282_residues
SLDTEISSRLAPAPRGWLKRGLAALMLSGLAACAAQNDFYPTKGDAKPHPGVARAKGHPIQGIDISKWQGPINWASVKSA
GTQFAYIKATEGGDHVDERFLENWDGAGRAGVPRGAYHFVFWCRSAEDQMAWFKRNVPNDPTALPPVLDVEWNGHSAKCP
KKLPKAQALSMIRYMLDEMEAYTGKRPIIYTDITFHKDVLEDELPDYPHWVRSTAAEPEQRYANRKWMLWQFTSTGRVPG
VRGDVDRNAFYGSPTEWASFLATDCDPREHRRLSSQGLCTGK

Specific function: This enzyme has both lysozyme (acetylmuramidase) and diacetylmuramidase activities [H]

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Secreted, extracellular space [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 25 family [H]

Homologues:

Organism=Escherichia coli, GI87082043, Length=212, Percent_Identity=36.3207547169811, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002053
- InterPro:   IPR008270
- InterPro:   IPR017853
- InterPro:   IPR018077
- InterPro:   IPR013781 [H]

Pfam domain/function: PF01183 Glyco_hydro_25 [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 31707; Mature: 31576

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDTEISSRLAPAPRGWLKRGLAALMLSGLAACAAQNDFYPTKGDAKPHPGVARAKGHP
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
IQGIDISKWQGPINWASVKSAGTQFAYIKATEGGDHVDERFLENWDGAGRAGVPRGAYHF
CCCCCHHCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEE
VFWCRSAEDQMAWFKRNVPNDPTALPPVLDVEWNGHSAKCPKKLPKAQALSMIRYMLDEM
EEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHH
EAYTGKRPIIYTDITFHKDVLEDELPDYPHWVRSTAAEPEQRYANRKWMLWQFTSTGRVP
HHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCC
GVRGDVDRNAFYGSPTEWASFLATDCDPREHRRLSSQGLCTGK
CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLDTEISSRLAPAPRGWLKRGLAALMLSGLAACAAQNDFYPTKGDAKPHPGVARAKGHP
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
IQGIDISKWQGPINWASVKSAGTQFAYIKATEGGDHVDERFLENWDGAGRAGVPRGAYHF
CCCCCHHCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEE
VFWCRSAEDQMAWFKRNVPNDPTALPPVLDVEWNGHSAKCPKKLPKAQALSMIRYMLDEM
EEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHH
EAYTGKRPIIYTDITFHKDVLEDELPDYPHWVRSTAAEPEQRYANRKWMLWQFTSTGRVP
HHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCC
GVRGDVDRNAFYGSPTEWASFLATDCDPREHRRLSSQGLCTGK
CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2341041 [H]