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The map label for this gene is yjeK [C]

Identifier: 218531178

GI number: 218531178

Start: 3410163

End: 3411224

Strand: Reverse

Name: yjeK [C]

Synonym: Mchl_3228

Alternate gene names: 218531178

Gene position: 3411224-3410163 (Counterclockwise)

Preceding gene: 218531179

Following gene: 218531177

Centisome position: 59.04

GC content: 71.47

Gene sequence:

>1062_bases
GTGAGCATCGCCCTCAAGAGTGCCACCGCGCTGGCCCGCGCCGGGCTGGTGGACGCAGCTGCCCTCCCCGCCCTGGAGCG
GGTCGCGGCGCGCTACGCCGTCTCGGTGACCGCCGACATGGCCGAGCTGATCGACGCCAACGATCCCGACGACCCGATCG
CCCGACAGTTCATCCCCCGCGCGGAAGAGATCGAGACGCGCCCGGAAGAGCGCGCCGACCCGATCGGCGACGACGCGCAT
GAGGCGGTGCCCGGCATCGTCCACCGCTATGCCGACCGGGTGCTGCTGAAGCCGCTGCACATCTGCCCGGTCTATTGCCG
CTTCTGCTTCCGCCGCGAGCGCGTCGGGCCCGCCGGCCAGGGTTCGCTCAGCGAGGCGGAGCTGGCGGCGGCCTACCGCT
ACATCGCCACGCATCCGGAGATCTGGGAGGTGGTGGTGACCGGGGGCGACCCCTTCGCCCTCTCGCCCCGGCGGCTCGCG
GCGATCACCGAGGCGCTCGGCGCGATCCCGCATGTGCGGGTGCTGCGCTTCCATACCCGCGTACCCGTGGTCGAGCCCGC
CCGCGTCGATGCGGCCCTGGTCGACGCCCTCAAGGGTTTCTCCGGCGCGGTGTTCGTGGCGCTCCACGCCAATCATCCGC
GCGAGTTCACACCGGCCGCGCGCGCGGCCATCGCCCAACTGGTCGATGCCGGCATCCCGATGGTGAGCCAGAGCGTGCTC
CTGCGCGGCGTCAACGACGATGCGGAAACGCTCGAAGCCCTGATGCGCCGGTTCGTCGAGAACCGGATCAAGCCCTACTA
CCTCCACCACGGCGACCTCGCGCCGGGCACCGGCCATCTGCGCACGGAACTGCCGCAGGGGCAGGCGCTGATGCGAACCT
TGCGCGGTCGCCTCTCCGGTCTCGCCCAGCCGCTCTACGTGCTCGACATTCCCGGCGGCCACGGCAAAGTGCCGGTGGGG
CCAAGCTATCTTGACGCGGCGGGCGAGTCCTGGCGGGTGACCGATCCGAGCGGGGCCGTTCACGCCTATCCCCCCGAGAG
CGACGACGAGGACCGAGGATGA

Upstream 100 bases:

>100_bases
GCGGCATCGCGCTCGGCTTCGACCGGCTGGTGATGCTCGCCACCGGCGCGCCCCGCATCGACGATGTGATCTGGACACCG
GTCCCCCGGAACCGGTCGCG

Downstream 100 bases:

>100_bases
CGTTGAAGCTGTGGGGGCGGGCCAGCTCCGGAAACGTGCAGAAGGCGCTCTGGGCGCTCGACGAACTTGGTCTGGCCTAT
GAACATATCGAGGCGGGCGG

Product: lysine 2,3-aminomutase YodO family protein

Products: (3S)-3,6-diaminohexanoate

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSIALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEEIETRPEERADPIGDDAH
EAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSLSEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLA
AITEALGAIPHVRVLRFHTRVPVVEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVL
LRGVNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQPLYVLDIPGGHGKVPVG
PSYLDAAGESWRVTDPSGAVHAYPPESDDEDRG

Sequences:

>Translated_353_residues
MSIALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEEIETRPEERADPIGDDAH
EAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSLSEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLA
AITEALGAIPHVRVLRFHTRVPVVEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVL
LRGVNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQPLYVLDIPGGHGKVPVG
PSYLDAAGESWRVTDPSGAVHAYPPESDDEDRG
>Mature_352_residues
SIALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEEIETRPEERADPIGDDAHE
AVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSLSEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAA
ITEALGAIPHVRVLRFHTRVPVVEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVLL
RGVNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQPLYVLDIPGGHGKVPVGP
SYLDAAGESWRVTDPSGAVHAYPPESDDEDRG

Specific function: Unknown

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=288, Percent_Identity=34.7222222222222, Blast_Score=185, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: 5.4.3.2

Molecular weight: Translated: 38107; Mature: 37976

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPR
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
AEEIETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQ
HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSLSEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTR
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHEECCC
VPVVEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVL
CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LRGVNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSG
HHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHH
LAQPLYVLDIPGGHGKVPVGPSYLDAAGESWRVTDPSGAVHAYPPESDDEDRG
HCCCEEEEECCCCCCCCCCCCHHHHHCCCCEEEECCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
SIALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPR
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
AEEIETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQ
HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSLSEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTR
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHEECCC
VPVVEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVL
CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LRGVNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSG
HHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHH
LAQPLYVLDIPGGHGKVPVGPSYLDAAGESWRVTDPSGAVHAYPPESDDEDRG
HCCCEEEEECCCCCCCCCCCCHHHHHCCCCEEEECCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-lysine

Specific reaction: L-lysine = (3S)-3,6-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]