| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is yliJ [H]
Identifier: 218531177
GI number: 218531177
Start: 3409543
End: 3410166
Strand: Reverse
Name: yliJ [H]
Synonym: Mchl_3227
Alternate gene names: 218531177
Gene position: 3410166-3409543 (Counterclockwise)
Preceding gene: 218531178
Following gene: 218531176
Centisome position: 59.02
GC content: 69.71
Gene sequence:
>624_bases ATGACGTTGAAGCTGTGGGGGCGGGCCAGCTCCGGAAACGTGCAGAAGGCGCTCTGGGCGCTCGACGAACTTGGTCTGGC CTATGAACATATCGAGGCGGGCGGCGCGCACGGCATCGTCAATGATGCCCGCTACCGCGCGATGAATCCCAACGGCCTCG TACCGACGCTGGAAGAGGATGGCTTCGTCCTCTGGGAGTCGAACGCGATCCTGCGCTACCTCGCCCATGCCCATGGCGGC CCGCTGGCCCTGCCGGAGGCGCCGCGCGCCCGCGCGCTCATCGACCAGTGGCTCGATTGGCAGGCCACCACCTTCACTCC GGCGATGCGCGACGCCTTTCTCCAACTCGTGCGCGTCGCCCCCGACAAGCGGGACGCGGGGGTGATCGAGGCGTCGCGGG CGGCTTCCGAGCGCTGTGCCGCCCTGCTCGATCAGCATCTGGCGGACACGGCCCACGTGGCGGGCGAGCACTTCTCCATC GCCGACATCGCTGTGGGGCTGGCAGCGAATCGCTGGTTCCAGCTGCCGCTGGAGCGGGAGGAGCGCCCGAACATCCGCCG CTGGCTGGGCACGCTCGCGCAACGGCCCGCCGCCTCGGCCGTTCTGTCGCTGCCGCTCACCTGA
Upstream 100 bases:
>100_bases GGCCAAGCTATCTTGACGCGGCGGGCGAGTCCTGGCGGGTGACCGATCCGAGCGGGGCCGTTCACGCCTATCCCCCCGAG AGCGACGACGAGGACCGAGG
Downstream 100 bases:
>100_bases TTTTCCCGGTGACGCTCAGCCCGTGACGGATGCCGTGTCGAACCCTGGACGAAAGAAGACGATGTTCTTCCCGCTCTCGA AGCTGATCTTCTTCGTCCTC
Product: glutathione S-transferase domain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTLKLWGRASSGNVQKALWALDELGLAYEHIEAGGAHGIVNDARYRAMNPNGLVPTLEEDGFVLWESNAILRYLAHAHGG PLALPEAPRARALIDQWLDWQATTFTPAMRDAFLQLVRVAPDKRDAGVIEASRAASERCAALLDQHLADTAHVAGEHFSI ADIAVGLAANRWFQLPLEREERPNIRRWLGTLAQRPAASAVLSLPLT
Sequences:
>Translated_207_residues MTLKLWGRASSGNVQKALWALDELGLAYEHIEAGGAHGIVNDARYRAMNPNGLVPTLEEDGFVLWESNAILRYLAHAHGG PLALPEAPRARALIDQWLDWQATTFTPAMRDAFLQLVRVAPDKRDAGVIEASRAASERCAALLDQHLADTAHVAGEHFSI ADIAVGLAANRWFQLPLEREERPNIRRWLGTLAQRPAASAVLSLPLT >Mature_206_residues TLKLWGRASSGNVQKALWALDELGLAYEHIEAGGAHGIVNDARYRAMNPNGLVPTLEEDGFVLWESNAILRYLAHAHGGP LALPEAPRARALIDQWLDWQATTFTPAMRDAFLQLVRVAPDKRDAGVIEASRAASERCAALLDQHLADTAHVAGEHFSIA DIAVGLAANRWFQLPLEREERPNIRRWLGTLAQRPAASAVLSLPLT
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081789, Length=207, Percent_Identity=42.0289855072464, Blast_Score=150, Evalue=7e-38, Organism=Escherichia coli, GI1788640, Length=201, Percent_Identity=28.8557213930348, Blast_Score=65, Evalue=3e-12, Organism=Drosophila melanogaster, GI17933730, Length=146, Percent_Identity=31.5068493150685, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI221378983, Length=146, Percent_Identity=32.8767123287671, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24646259, Length=146, Percent_Identity=32.8767123287671, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI17864596, Length=188, Percent_Identity=26.063829787234, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922532, Length=203, Percent_Identity=28.0788177339901, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17864594, Length=145, Percent_Identity=29.6551724137931, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI17864598, Length=146, Percent_Identity=29.4520547945205, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI20130115, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654965, Length=199, Percent_Identity=29.6482412060301, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24654996, Length=208, Percent_Identity=27.8846153846154, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 22680; Mature: 22549
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKLWGRASSGNVQKALWALDELGLAYEHIEAGGAHGIVNDARYRAMNPNGLVPTLEED CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCC GFVLWESNAILRYLAHAHGGPLALPEAPRARALIDQWLDWQATTFTPAMRDAFLQLVRVA CEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC PDKRDAGVIEASRAASERCAALLDQHLADTAHVAGEHFSIADIAVGLAANRWFQLPLERE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEECCCCCC ERPNIRRWLGTLAQRPAASAVLSLPLT CCCCHHHHHHHHHCCCHHHHHEECCCC >Mature Secondary Structure TLKLWGRASSGNVQKALWALDELGLAYEHIEAGGAHGIVNDARYRAMNPNGLVPTLEED EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCC GFVLWESNAILRYLAHAHGGPLALPEAPRARALIDQWLDWQATTFTPAMRDAFLQLVRVA CEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC PDKRDAGVIEASRAASERCAALLDQHLADTAHVAGEHFSIADIAVGLAANRWFQLPLERE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEECCCCCC ERPNIRRWLGTLAQRPAASAVLSLPLT CCCCHHHHHHHHHCCCHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]