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The map label for this gene is yazB [H]

Identifier: 218235456

GI number: 218235456

Start: 79081

End: 79284

Strand: Direct

Name: yazB [H]

Synonym: BCB4264_A0082

Alternate gene names: 218235456

Gene position: 79081-79284 (Clockwise)

Preceding gene: 218235679

Following gene: 218231778

Centisome position: 1.46

GC content: 39.22

Gene sequence:

>204_bases
ATGGAAGCAGAAAAATGGGGAAGACGCATTCGTGCTTTTCGAAAGCTAAAAGGCTATACACAAGAAGGTTTTGCTAAAGA
ACTAGGGGTATCTGTATCTGTTTTAGGTGAGGTTGAGAGAGGGAATAGATCGCCTTCTCAAGATTTTGTAGTAGAAGTTG
CTAAGGCATTAAATGTTTCGATAGAGGAATTAATGCCAAAGTGA

Upstream 100 bases:

>100_bases
CTTTTGTTATCGTTCCGTTGTTAGAGATTAATCAAGACATAAAACAAAACATTTCACGTTCACAAGTAGAAGAAATGAAA
AGGCGAGAGGGAGTAACGGT

Downstream 100 bases:

>100_bases
TTGTACAGGAAGGAGTAGGTTGATTGTTAAAGATTGCAAATATCGAGATGAAAAATCCGGTTGTACTAGCACCGATGGCG
GGAGTGTGTAACTCTGCATT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MEAEKWGRRIRAFRKLKGYTQEGFAKELGVSVSVLGEVERGNRSPSQDFVVEVAKALNVSIEELMPK

Sequences:

>Translated_67_residues
MEAEKWGRRIRAFRKLKGYTQEGFAKELGVSVSVLGEVERGNRSPSQDFVVEVAKALNVSIEELMPK
>Mature_67_residues
MEAEKWGRRIRAFRKLKGYTQEGFAKELGVSVSVLGEVERGNRSPSQDFVVEVAKALNVSIEELMPK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7553; Mature: 7553

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAEKWGRRIRAFRKLKGYTQEGFAKELGVSVSVLGEVERGNRSPSQDFVVEVAKALNVS
CCHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
IEELMPK
HHHHCCC
>Mature Secondary Structure
MEAEKWGRRIRAFRKLKGYTQEGFAKELGVSVSVLGEVERGNRSPSQDFVVEVAKALNVS
CCHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
IEELMPK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]