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The map label for this gene is yjbK [H]

Identifier: 218234387

GI number: 218234387

Start: 1219309

End: 1219887

Strand: Reverse

Name: yjbK [H]

Synonym: BCB4264_A1251

Alternate gene names: 218234387

Gene position: 1219887-1219309 (Counterclockwise)

Preceding gene: 218234984

Following gene: 218233731

Centisome position: 22.51

GC content: 32.82

Gene sequence:

>579_bases
ATGACACAAGAAATTGAAATTGAATTCAAAAATATCGTTACAAAAGAAGAATTCGATACATTATGTAAATCGTTTTCTAT
TGAAGCATTTACAAAACAAGTGAATCACTACTTTGAAACACCTGACTTCTCGTTAAAAGAAGCTGGCTCTGCACTTCGTA
TTCGTCATAAAGGAGAAACTTATACGTTAACGTTGAAACAACCTGCAGAAATCGGTTTATTAGAAACGCATCAAGTCGTA
ACAGAAGACGAAGCAAAAATGATGATGGAAACAAACACAATCATTCAAGGAGCAGTAGTAGATCAATTACACAAATTACA
AATTCCTGTTTCTGCTTTAACATATATGGGTAGTTTAACAACAGAAAGAGCAGAAACATTATTTAAAGGCGGAACGCTTG
TCTTTGATCATAGTTTCTATTACAATCACGATGATTATGAAATTGAATTTGAAGTGCAAGATGAAGAAACAGGAAAAGCT
GCATTTATTCATTTATTAACGCAACATAACATACCTGTTCGCCATACAAATAACAAAGTAAAACGCTTTTTCCTTGCCAA
ACAAAAAAAAGCACGCTAA

Upstream 100 bases:

>100_bases
TATTGTATCATAACATGGACGCAAACAAATAAAACATTGAACCAAATTTATGAAAAAGCGATAATGTGTAAAGAATTATT
TTTCAAAAGGAGATTATACA

Downstream 100 bases:

>100_bases
AGTGAAAATTCCACTAGTGAATATGTTTCACTAGTGGATACATCTCACTAAAAAAGTTTACACCCGTAGAATAAGCAAAG
AATCTTTGAGAAAGCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTQEIEIEFKNIVTKEEFDTLCKSFSIEAFTKQVNHYFETPDFSLKEAGSALRIRHKGETYTLTLKQPAEIGLLETHQVV
TEDEAKMMMETNTIIQGAVVDQLHKLQIPVSALTYMGSLTTERAETLFKGGTLVFDHSFYYNHDDYEIEFEVQDEETGKA
AFIHLLTQHNIPVRHTNNKVKRFFLAKQKKAR

Sequences:

>Translated_192_residues
MTQEIEIEFKNIVTKEEFDTLCKSFSIEAFTKQVNHYFETPDFSLKEAGSALRIRHKGETYTLTLKQPAEIGLLETHQVV
TEDEAKMMMETNTIIQGAVVDQLHKLQIPVSALTYMGSLTTERAETLFKGGTLVFDHSFYYNHDDYEIEFEVQDEETGKA
AFIHLLTQHNIPVRHTNNKVKRFFLAKQKKAR
>Mature_191_residues
TQEIEIEFKNIVTKEEFDTLCKSFSIEAFTKQVNHYFETPDFSLKEAGSALRIRHKGETYTLTLKQPAEIGLLETHQVVT
EDEAKMMMETNTIIQGAVVDQLHKLQIPVSALTYMGSLTTERAETLFKGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAA
FIHLLTQHNIPVRHTNNKVKRFFLAKQKKAR

Specific function: Unknown

COG id: COG4116

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206
- InterPro:   IPR009195 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 22192; Mature: 22061

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEIEIEFKNIVTKEEFDTLCKSFSIEAFTKQVNHYFETPDFSLKEAGSALRIRHKGET
CCCEEEEHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCE
YTLTLKQPAEIGLLETHQVVTEDEAKMMMETNTIIQGAVVDQLHKLQIPVSALTYMGSLT
EEEEECCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH
TERAETLFKGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLTQHNIPVRHTNNKV
HHHHHHHHCCCEEEEECCEEECCCCEEEEEEECCCCCCCEEEEEEEHHCCCCEEECCCHH
KRFFLAKQKKAR
HHHHHHHHCCCC
>Mature Secondary Structure 
TQEIEIEFKNIVTKEEFDTLCKSFSIEAFTKQVNHYFETPDFSLKEAGSALRIRHKGET
CCEEEEHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCE
YTLTLKQPAEIGLLETHQVVTEDEAKMMMETNTIIQGAVVDQLHKLQIPVSALTYMGSLT
EEEEECCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH
TERAETLFKGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLTQHNIPVRHTNNKV
HHHHHHHHCCCEEEEECCEEECCCCEEEEEEECCCCCCCEEEEEEEHHCCCCEEECCCHH
KRFFLAKQKKAR
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]