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The map label for this gene is yobO [H]

Identifier: 218234984

GI number: 218234984

Start: 1222845

End: 1224233

Strand: Reverse

Name: yobO [H]

Synonym: BCB4264_A1256

Alternate gene names: 218234984

Gene position: 1224233-1222845 (Counterclockwise)

Preceding gene: 218235507

Following gene: 218234387

Centisome position: 22.59

GC content: 40.1

Gene sequence:

>1389_bases
ATGAAGAAAAAATCTTCTAAACAAAAAAGAAAATTTCCCCCTTTATATCTGCCCATGTACGGAATTAACAACTGGTGTAG
TATTCGGGCTGCAGCGATAGAAGAACTGGAAGAACAAGAGTCATCAAAAAAAAGCAAAGTAAAACCAACATATGTCTCTT
TAGAAAATGCTGTGATGAGCCGCATAATCGATCGCAGAAAAATAAAGATGCAACAAAAAAATAAACAGCTCTCAAATCAA
GATGAACAGGTAATACATTCTAATCAAACAGAAGAAAAGACGGAAGAAAATATTTCTGTAGCAATAAATAAAAAAGTGGA
ACCAGAAATTCCAGCTGCTATTATAAACAAAGTAAAAAAAATAAAAGAGGCATTAGCTTCATCGAATGATATACAAACTG
AAAAACCACTCATAATTGAGACACCTACACCTGAAAATACAAAAGTTAAAAGGGGCGGCCGATATGCATATGCGGAAGGG
CTTCACTCTCATGCGGAGGGCATGGCAGCACATGCGGAAGGCTTATTAACACACGCAAAAGGTTCTTTCTCTCATGCAGA
AGGATCAAACTCAAAAGCAACCGGACATAGTTCCCATAGTGAGGGAAGTGAAACGACAGCAGGCGGAGCTTATTCTCATG
CAGAGGGTAAACAGACGATTGCTTTAGGCGAAGCAGCACACGCAGAAGGAACCGCAACTATCGCTAACGGATCCTCTTCT
CATGCGGAAGGTCATCATACATCAACAGCTCATTTTGCAGGTAGCCATATTATGGGGCGCTTCGGCACTGCAGAAGAAGC
TTATTCTTGGTTTATTGCAAATGGTGTAAGCGACACCGACCATAATATCGGGGCTAAATGGCTTGCCCATAATGGAGAAA
TGTACATTGAGGGTGCGTCTTACAATGCAAGTGGAACGGATTTTGCACAAATGTTTGAAACCGAAGATCATAAACCTATT
GATGTCGGTTATTTCGTTACATTTAGTAGCGAAGAAAAAATTCGGCTAGCTACTTCACACGACTCGTTCATTTTAGGAAT
ATCTAGTGCAACCCCTGCCCTTATAGGAAATAGCGGGGCTTTAAGTTGGGAAAAACGTTATAAAACAGATAACTTTGGAA
AACGCCAATATGTATGGACGGAAACCGAAGAAATACAACCTCTTTTAAATACAGAATGGGATCCAACTCGCAAATATGTA
GCAAGAAAAGATCGCGCCGAGTGGCTTCCTGTCGGATTAATTGGACAAATGTTAGTACGTGATGACGGCACTTGCGAAGC
ACATGGATTTTGTCTTCCAAATGACAATGGCATTGCTACAAAAGCCGAAAGTGGATTTTTCGTTATAAAGCGTACGGGTG
AAAACCAAATTTTAATATTATTCCGCTAA

Upstream 100 bases:

>100_bases
GCAGATCTCATATAAAACTAGGTAAAGTAATTAAAAAAAGATGCAATAAAGTGCATCTTTTTTTAATTACACTACATATA
ATGTCGCAGGAGGTGACAGA

Downstream 100 bases:

>100_bases
GAAAAAAGGGAACAAAATTCTTTATAATATAAGAATTTTGTTCCCTTTTTAAGTATGCCGCAACACTTCTTGCATATCGC
TTGGAAGCTTTATAGTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKKKSSKQKRKFPPLYLPMYGINNWCSIRAAAIEELEEQESSKKSKVKPTYVSLENAVMSRIIDRRKIKMQQKNKQLSNQ
DEQVIHSNQTEEKTEENISVAINKKVEPEIPAAIINKVKKIKEALASSNDIQTEKPLIIETPTPENTKVKRGGRYAYAEG
LHSHAEGMAAHAEGLLTHAKGSFSHAEGSNSKATGHSSHSEGSETTAGGAYSHAEGKQTIALGEAAHAEGTATIANGSSS
HAEGHHTSTAHFAGSHIMGRFGTAEEAYSWFIANGVSDTDHNIGAKWLAHNGEMYIEGASYNASGTDFAQMFETEDHKPI
DVGYFVTFSSEEKIRLATSHDSFILGISSATPALIGNSGALSWEKRYKTDNFGKRQYVWTETEEIQPLLNTEWDPTRKYV
ARKDRAEWLPVGLIGQMLVRDDGTCEAHGFCLPNDNGIATKAESGFFVIKRTGENQILILFR

Sequences:

>Translated_462_residues
MKKKSSKQKRKFPPLYLPMYGINNWCSIRAAAIEELEEQESSKKSKVKPTYVSLENAVMSRIIDRRKIKMQQKNKQLSNQ
DEQVIHSNQTEEKTEENISVAINKKVEPEIPAAIINKVKKIKEALASSNDIQTEKPLIIETPTPENTKVKRGGRYAYAEG
LHSHAEGMAAHAEGLLTHAKGSFSHAEGSNSKATGHSSHSEGSETTAGGAYSHAEGKQTIALGEAAHAEGTATIANGSSS
HAEGHHTSTAHFAGSHIMGRFGTAEEAYSWFIANGVSDTDHNIGAKWLAHNGEMYIEGASYNASGTDFAQMFETEDHKPI
DVGYFVTFSSEEKIRLATSHDSFILGISSATPALIGNSGALSWEKRYKTDNFGKRQYVWTETEEIQPLLNTEWDPTRKYV
ARKDRAEWLPVGLIGQMLVRDDGTCEAHGFCLPNDNGIATKAESGFFVIKRTGENQILILFR
>Mature_462_residues
MKKKSSKQKRKFPPLYLPMYGINNWCSIRAAAIEELEEQESSKKSKVKPTYVSLENAVMSRIIDRRKIKMQQKNKQLSNQ
DEQVIHSNQTEEKTEENISVAINKKVEPEIPAAIINKVKKIKEALASSNDIQTEKPLIIETPTPENTKVKRGGRYAYAEG
LHSHAEGMAAHAEGLLTHAKGSFSHAEGSNSKATGHSSHSEGSETTAGGAYSHAEGKQTIALGEAAHAEGTATIANGSSS
HAEGHHTSTAHFAGSHIMGRFGTAEEAYSWFIANGVSDTDHNIGAKWLAHNGEMYIEGASYNASGTDFAQMFETEDHKPI
DVGYFVTFSSEEKIRLATSHDSFILGISSATPALIGNSGALSWEKRYKTDNFGKRQYVWTETEEIQPLLNTEWDPTRKYV
ARKDRAEWLPVGLIGQMLVRDDGTCEAHGFCLPNDNGIATKAESGFFVIKRTGENQILILFR

Specific function: Unknown

COG id: COG5295

COG function: function code UW; Autotransporter adhesin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021865
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF11962 DUF3476 [H]

EC number: NA

Molecular weight: Translated: 50884; Mature: 50884

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00778 HIS_ACID_PHOSPHAT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSSKQKRKFPPLYLPMYGINNWCSIRAAAIEELEEQESSKKSKVKPTYVSLENAVMS
CCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
RIIDRRKIKMQQKNKQLSNQDEQVIHSNQTEEKTEENISVAINKKVEPEIPAAIINKVKK
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHH
IKEALASSNDIQTEKPLIIETPTPENTKVKRGGRYAYAEGLHSHAEGMAAHAEGLLTHAK
HHHHHHCCCCCCCCCCEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GSFSHAEGSNSKATGHSSHSEGSETTAGGAYSHAEGKQTIALGEAAHAEGTATIANGSSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCEEEECCCCC
HAEGHHTSTAHFAGSHIMGRFGTAEEAYSWFIANGVSDTDHNIGAKWLAHNGEMYIEGAS
CCCCCCCCCHHHCCCHHHCCCCCHHHHHEEEEECCCCCCCCCCCCEEEECCCEEEEEECC
YNASGTDFAQMFETEDHKPIDVGYFVTFSSEEKIRLATSHDSFILGISSATPALIGNSGA
CCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEECCCCC
LSWEKRYKTDNFGKRQYVWTETEEIQPLLNTEWDPTRKYVARKDRAEWLPVGLIGQMLVR
CCHHHHCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHC
DDGTCEAHGFCLPNDNGIATKAESGFFVIKRTGENQILILFR
CCCCCCCCCEECCCCCCCEEECCCCEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MKKKSSKQKRKFPPLYLPMYGINNWCSIRAAAIEELEEQESSKKSKVKPTYVSLENAVMS
CCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
RIIDRRKIKMQQKNKQLSNQDEQVIHSNQTEEKTEENISVAINKKVEPEIPAAIINKVKK
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHH
IKEALASSNDIQTEKPLIIETPTPENTKVKRGGRYAYAEGLHSHAEGMAAHAEGLLTHAK
HHHHHHCCCCCCCCCCEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GSFSHAEGSNSKATGHSSHSEGSETTAGGAYSHAEGKQTIALGEAAHAEGTATIANGSSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCEEEECCCCC
HAEGHHTSTAHFAGSHIMGRFGTAEEAYSWFIANGVSDTDHNIGAKWLAHNGEMYIEGAS
CCCCCCCCCHHHCCCHHHCCCCCHHHHHEEEEECCCCCCCCCCCCEEEECCCEEEEEECC
YNASGTDFAQMFETEDHKPIDVGYFVTFSSEEKIRLATSHDSFILGISSATPALIGNSGA
CCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEECCCCC
LSWEKRYKTDNFGKRQYVWTETEEIQPLLNTEWDPTRKYVARKDRAEWLPVGLIGQMLVR
CCHHHHCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHC
DDGTCEAHGFCLPNDNGIATKAESGFFVIKRTGENQILILFR
CCCCCCCCCEECCCCCCCEEECCCCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]