Click here to switch to the map view.

The map label for this gene is yjbI [H]

Identifier: 218233731

GI number: 218233731

Start: 1218742

End: 1219140

Strand: Reverse

Name: yjbI [H]

Synonym: BCB4264_A1250

Alternate gene names: 218233731

Gene position: 1219140-1218742 (Counterclockwise)

Preceding gene: 218234387

Following gene: 218233238

Centisome position: 22.5

GC content: 39.85

Gene sequence:

>399_bases
ATGAGCAAGCAACCGATGACACCATTTGAAGCAATTGGCGGTGAACAATGCATTGCAATATTAGTAGATACATTTTATTC
CTATGTCAGTAAACACCCTGACTTATCTCCCATCTTCCCGGAAGATTTAACAGAAACCGCTAGGAAGCAGAAGCAATTTT
TAACACAATATTTAGGTGGTCCTAATTTGTACACTGAAGAACATGGTCATCCTATGTTAAGGGCACGCCATCTTCCGTTT
GAGATTACTCCAAAACGAGCAGAGGCTTGGCTATCATGTATGGAGCAAGCAATGGATGATACTGGAGTTCATGGTCATAT
AAAAGAGTTTGTTTTTGAACGTTTAGCATTAACCGCTCAGCATATGGTTAATACTCCAAACGAAACAGGTGAAGTGTAA

Upstream 100 bases:

>100_bases
GAATAAGCAAAGAATCTTTGAGAAAGCTGTTTATTTGCCCTCTCGAACATTCCATTGCTACAATAGATATACATTTCATG
GAAAAAGGAGTTTATAAAGG

Downstream 100 bases:

>100_bases
TGGATAAGCAGGAAGCAAAGCATATAAATATGCCATCTCCTTCCGCATGCGAGCATAAGTCTGTAGAAGCATATTTATTT
ATTGATCCACTTTGTAAAGA

Product: globin family protein

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKQPMTPFEAIGGEQCIAILVDTFYSYVSKHPDLSPIFPEDLTETARKQKQFLTQYLGGPNLYTEEHGHPMLRARHLPF
EITPKRAEAWLSCMEQAMDDTGVHGHIKEFVFERLALTAQHMVNTPNETGEV

Sequences:

>Translated_132_residues
MSKQPMTPFEAIGGEQCIAILVDTFYSYVSKHPDLSPIFPEDLTETARKQKQFLTQYLGGPNLYTEEHGHPMLRARHLPF
EITPKRAEAWLSCMEQAMDDTGVHGHIKEFVFERLALTAQHMVNTPNETGEV
>Mature_131_residues
SKQPMTPFEAIGGEQCIAILVDTFYSYVSKHPDLSPIFPEDLTETARKQKQFLTQYLGGPNLYTEEHGHPMLRARHLPFE
ITPKRAEAWLSCMEQAMDDTGVHGHIKEFVFERLALTAQHMVNTPNETGEV

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15017; Mature: 14886

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQPMTPFEAIGGEQCIAILVDTFYSYVSKHPDLSPIFPEDLTETARKQKQFLTQYLGG
CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PNLYTEEHGHPMLRARHLPFEITPKRAEAWLSCMEQAMDDTGVHGHIKEFVFERLALTAQ
CCCCCCCCCCHHHHHCCCCCEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HMVNTPNETGEV
HHHCCCCCCCCC
>Mature Secondary Structure 
SKQPMTPFEAIGGEQCIAILVDTFYSYVSKHPDLSPIFPEDLTETARKQKQFLTQYLGG
CCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PNLYTEEHGHPMLRARHLPFEITPKRAEAWLSCMEQAMDDTGVHGHIKEFVFERLALTAQ
CCCCCCCCCCHHHHHCCCCCEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HMVNTPNETGEV
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]