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The map label for this gene is pagR [H]

Identifier: 218231923

GI number: 218231923

Start: 637172

End: 637459

Strand: Direct

Name: pagR [H]

Synonym: BCB4264_A0649

Alternate gene names: 218231923

Gene position: 637172-637459 (Clockwise)

Preceding gene: 218231023

Following gene: 218231242

Centisome position: 11.76

GC content: 33.68

Gene sequence:

>288_bases
ATGAGCCAAAATCAATTCGAATGTCGTATTTCAGAAGAAGATGTACAAATGTTAAGAGCGTTAGCTCACCCACTTCGTCT
ACGTCTAGTAATGGAACTTATGCAAAGAGGAACATGTAATGTAACACAACTACAGGAAGTATTAGAAATTCCGCAATCAA
CGGTTTCACAACATTTAACAAAGTTAAAGCAAAATAAAGTAGTGCGCTTTGAAAGACGAGGATTAGAAGTGTATTATCAA
ATCCATAATGATAAAGTAAGTGCGGTAGTAAAAACATTATTTTCTTAA

Upstream 100 bases:

>100_bases
GTTGATAAAGTTATGTCGTAACAGGAAATATAAGAACAGATATATAAATAAATAAAAAGAACATAAAAACGCAAATAAAA
ACGAAAATGAGGGGAACTTT

Downstream 100 bases:

>100_bases
AATTTGAATATTATGGAAAAAGACGTATGGAATATACGTCTTTTTTTATTTGTCAGAAAGGTAGCGAGAGAGTAAATATT
AGCATGTGAGGAAGAAATGA

Product: transcriptional regulator, ArsR family

Products: NA

Alternate protein names: Protective antigen repressor [H]

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSQNQFECRISEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLTKLKQNKVVRFERRGLEVYYQ
IHNDKVSAVVKTLFS

Sequences:

>Translated_95_residues
MSQNQFECRISEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLTKLKQNKVVRFERRGLEVYYQ
IHNDKVSAVVKTLFS
>Mature_94_residues
SQNQFECRISEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLTKLKQNKVVRFERRGLEVYYQI
HNDKVSAVVKTLFS

Specific function: Represses the expression of the pagA and atxA genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11157; Mature: 11026

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNQFECRISEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLT
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH
KLKQNKVVRFERRGLEVYYQIHNDKVSAVVKTLFS
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC
>Mature Secondary Structure 
SQNQFECRISEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLT
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH
KLKQNKVVRFERRGLEVYYQIHNDKVSAVVKTLFS
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10419943; 10515943; 12004073; 12067380; 10475965 [H]