Click here to switch to the map view.

The map label for this gene is sspH [H]

Identifier: 218231242

GI number: 218231242

Start: 637651

End: 637830

Strand: Direct

Name: sspH [H]

Synonym: BCB4264_A0650

Alternate gene names: 218231242

Gene position: 637651-637830 (Clockwise)

Preceding gene: 218231923

Following gene: 218232282

Centisome position: 11.77

GC content: 42.22

Gene sequence:

>180_bases
ATGGATGTGAAACGTGTGAAACAAATTTTATCTTCTTCAAGTAGAATTGACGTTACATATGAGGGCGTACCAGTATGGAT
TGAGAGCTGTGATGAGCAGAAGGGGAGTGCTCAAGTGTATGATGTATCTAATCCTGGTGAGAGCGTTCATGTGGACGTGA
CAGCTTTAGAGGAGAAGTAA

Upstream 100 bases:

>100_bases
AAGAAATGACTATCAATCAACATGCTGCCTTACGGAATATATTCTAAAAGGAAAAGAAAAAATAGAAAGGAGTGTAGTAA
GCAAAAGGAGGGATAGTAGT

Downstream 100 bases:

>100_bases
TAGAAAAGACGCTTCTGATTTTAGAAGCGTCTGTTTTTGTATTATTCCATCATACTCGCAACTTTTTTAGAGAAGAGAAG
GAGTACAAGTCCTAAGACGA

Product: acid-soluble spore protein H

Products: NA

Alternate protein names: SASP H 1 [H]

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MDVKRVKQILSSSSRIDVTYEGVPVWIESCDEQKGSAQVYDVSNPGESVHVDVTALEEK

Sequences:

>Translated_59_residues
MDVKRVKQILSSSSRIDVTYEGVPVWIESCDEQKGSAQVYDVSNPGESVHVDVTALEEK
>Mature_59_residues
MDVKRVKQILSSSSRIDVTYEGVPVWIESCDEQKGSAQVYDVSNPGESVHVDVTALEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore core [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sspH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012610
- ProDom:   PD052450 [H]

Pfam domain/function: PF08141 SspH [H]

EC number: NA

Molecular weight: Translated: 6539; Mature: 6539

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKRVKQILSSSSRIDVTYEGVPVWIESCDEQKGSAQVYDVSNPGESVHVDVTALEEK
CCHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MDVKRVKQILSSSSRIDVTYEGVPVWIESCDEQKGSAQVYDVSNPGESVHVDVTALEEK
CCHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]