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The map label for this gene is yliC [C]

Identifier: 218231914

GI number: 218231914

Start: 826288

End: 827127

Strand: Direct

Name: yliC [C]

Synonym: BCB4264_A0854

Alternate gene names: 218231914

Gene position: 826288-827127 (Clockwise)

Preceding gene: 218234792

Following gene: 218230966

Centisome position: 15.25

GC content: 29.88

Gene sequence:

>840_bases
ATGGAAGTGACAATTCAATTTATTATTTCGATTTTGGGGATTATTATGTTAGGGGCTCTGCCGAAATTGTTTTATGGATT
TAAGCTGGATGTATCAAAGTACATACAGAGTTTAAAAGAAGTGTTTGTGAACTTAATGGATATTTCCAATTTGCAATATG
TGAAAGGTAAATTTTTATTTCCGCAGCTGTTCGTCCATTATAAAGAAACGATTATTATTTTTTTAGCTGCTTTTTTTATT
TCATTATTTGTAGCATTTTGTATTGTTTATGTAATTATGAGTAGTTCACCGCGTATACAACATCGAATTAAATCATTTCT
TATCTTCCTAGAATCTATTCCAGATATCCTTCTTATTTTAGTATCACAAATTTTAGTTATATGGTTTTTTAAACAAACAG
GTTTTTTACCTTTTCAAATTGCTTCAATTGGAGGCGAGTCGATTAGAGGATTGCCGATACTTTGTTTGAGCATCCCGACT
ACGATTATGTTTGTAAAAATGGTCGTGCTTCGTTTTGAAAATGAACTAGAAAAAGATTATGTACTATTTGCTAAGGCGAA
AGGGCTGGGGCGCTTTCATATTTTAAATCGTCATATTTTACGAAATGTGTTGCTTAGTACATTATTCTTTGCGAAAACGA
ATATCTTTTTTATGTTATCTAATTTATATATTATAGAATGGATTTTTAATACGGGTGGTATTTTTATGTTTTTGAAATCG
TATTTTGGTATTAGAGTTGAGGTTTTCATCGTTAGTGTGCTTCTTATATATATTCCGATTTTTATTTTATTTAAATTGTT
TCATTATCTCATTCCGGCTGCGATGAAGGAGAGATTATAA

Upstream 100 bases:

>100_bases
GTTTGAATATTTACAATTCAGAAAATTAAGAATAAAATTAGAGAGTAAAATATAAAGAGAGAGAAGGGAAAACGTGGTCA
AAAAAGTTTTTCTGAATGGG

Downstream 100 bases:

>100_bases
TATGTGGACGTATATAAAACGTGATAAAAGATTTTGGATAAGCATTGGGTTTCTTCTCCTATTAGTTCTTTTGAGCATCG
GAAATACGTTATGGAATGAT

Product: oligopeptide transport system permease protein OppB

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Oligopeptide Transport System Permease Protein-Like Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MEVTIQFIISILGIIMLGALPKLFYGFKLDVSKYIQSLKEVFVNLMDISNLQYVKGKFLFPQLFVHYKETIIIFLAAFFI
SLFVAFCIVYVIMSSSPRIQHRIKSFLIFLESIPDILLILVSQILVIWFFKQTGFLPFQIASIGGESIRGLPILCLSIPT
TIMFVKMVVLRFENELEKDYVLFAKAKGLGRFHILNRHILRNVLLSTLFFAKTNIFFMLSNLYIIEWIFNTGGIFMFLKS
YFGIRVEVFIVSVLLIYIPIFILFKLFHYLIPAAMKERL

Sequences:

>Translated_279_residues
MEVTIQFIISILGIIMLGALPKLFYGFKLDVSKYIQSLKEVFVNLMDISNLQYVKGKFLFPQLFVHYKETIIIFLAAFFI
SLFVAFCIVYVIMSSSPRIQHRIKSFLIFLESIPDILLILVSQILVIWFFKQTGFLPFQIASIGGESIRGLPILCLSIPT
TIMFVKMVVLRFENELEKDYVLFAKAKGLGRFHILNRHILRNVLLSTLFFAKTNIFFMLSNLYIIEWIFNTGGIFMFLKS
YFGIRVEVFIVSVLLIYIPIFILFKLFHYLIPAAMKERL
>Mature_279_residues
MEVTIQFIISILGIIMLGALPKLFYGFKLDVSKYIQSLKEVFVNLMDISNLQYVKGKFLFPQLFVHYKETIIIFLAAFFI
SLFVAFCIVYVIMSSSPRIQHRIKSFLIFLESIPDILLILVSQILVIWFFKQTGFLPFQIASIGGESIRGLPILCLSIPT
TIMFVKMVVLRFENELEKDYVLFAKAKGLGRFHILNRHILRNVLLSTLFFAKTNIFFMLSNLYIIEWIFNTGGIFMFLKS
YFGIRVEVFIVSVLLIYIPIFILFKLFHYLIPAAMKERL

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yliabcd; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32467; Mature: 32467

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVTIQFIISILGIIMLGALPKLFYGFKLDVSKYIQSLKEVFVNLMDISNLQYVKGKFLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
PQLFVHYKETIIIFLAAFFISLFVAFCIVYVIMSSSPRIQHRIKSFLIFLESIPDILLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSQILVIWFFKQTGFLPFQIASIGGESIRGLPILCLSIPTTIMFVKMVVLRFENELEKDY
HHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLFAKAKGLGRFHILNRHILRNVLLSTLFFAKTNIFFMLSNLYIIEWIFNTGGIFMFLKS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YFGIRVEVFIVSVLLIYIPIFILFKLFHYLIPAAMKERL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA