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The map label for this gene is yliD [C]

Identifier: 218230966

GI number: 218230966

Start: 827129

End: 828133

Strand: Direct

Name: yliD [C]

Synonym: BCB4264_A0855

Alternate gene names: 218230966

Gene position: 827129-828133 (Clockwise)

Preceding gene: 218231914

Following gene: 218234021

Centisome position: 15.26

GC content: 37.31

Gene sequence:

>1005_bases
ATGTGGACGTATATAAAACGTGATAAAAGATTTTGGATAAGCATTGGGTTTCTTCTCCTATTAGTTCTTTTGAGCATCGG
AAATACGTTATGGAATGATGGACATATTAGACAAGTTACATTGCAATATGATGCGGATGAAAATCCACAAGTGCCACCGT
TTCCACCTTCATTACAATTTTTACTCGGGACAGACCGGAAAGGGTATGACCTGTTACATTTAGTCATTGAGGGCGCGAAG
TGGACGATTGGTATATCTATTTTAATTGCGGCACTTAGAATGGTAATAGGTGTGTTTTTCGGTGTCGTACTCGGAACGTA
TATAAAAAGAGGATTTTCAAAAATTGAGGCTTTCTTTGATAGTTTTACAGTTATTCCGACAGTTATGATTGCGTATTTTT
TTCTTCAATCTGCAAATGCATTTGGAAGCGGAGAGGAGACAACAACCTTTTTTGAAAGGGCTTCGTTTCAAGTGGTATTA
CTTGTACTGCTTGTAATGCCAGTTATTGCACTGTATGTTGCGAAGGAAGTTCGTAAATTGCGAACGGAGGAATTTGTTGA
TGCCGCACGCATATTAGGTGGATCGAGAAGACATATTGTTATAAAGCATCTTTTCCCGCACCTTTATATGACGTTTATAC
TTGTATTTTTTCAGCAGTTTACGCAGACTCTTACTATTTTACTGCACTTAGGGTTACTAGAAATATTCTTTGGCGGAACG
GTTAAGTTTTTAGGACCGATAGAAGAAATAGAATCTTACACACATGAATGGTCAGGGCTAATTGGAGTCTATTTTAGATC
TTTAACAGTGCATCCATGGATTCCTCTCGTCCCAATTACATTTTTTGGACTTACTATTTTTTCAGGAAATATGATTGTAA
AAAGTATTGAAGAGGCGATGATGAAAGTAAGGTTAGGAGGAGAGATAAAGAAGGAAGTTGTAGAAGAGGAACAATCTGCT
GTACAGTCAAAGGAAGAGTTGTTTACGTTTAAACATACGATGTGA

Upstream 100 bases:

>100_bases
GTTTTCATCGTTAGTGTGCTTCTTATATATATTCCGATTTTTATTTTATTTAAATTGTTTCATTATCTCATTCCGGCTGC
GATGAAGGAGAGATTATAAT

Downstream 100 bases:

>100_bases
AGAGAAAAAGAAGCAAGCATGGATTTCATGCTTGCTTCTTTTTACTTTGCAGAAACTTCACCTTCAGCTTCTGTTTGCGG
AATAAAGTATCCGATTATAC

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: Oligopeptide Transport System Permease; Oligopeptide ABC Transporter Permease Protein; Oligopeptide Transport System Permease Protein OppC; Oligopeptide Transport System Permease Protein-Like Protein; Oligopeptide ABC Transporter Permease; Oligopeptide ABC-Type Transporter Permease Component OPPC

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQFLLGTDRKGYDLLHLVIEGAK
WTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFDSFTVIPTVMIAYFFLQSANAFGSGEETTTFFERASFQVVL
LVLLVMPVIALYVAKEVRKLRTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVHPWIPLVPITFFGLTIFSGNMIVKSIEEAMMKVRLGGEIKKEVVEEEQSA
VQSKEELFTFKHTM

Sequences:

>Translated_334_residues
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQFLLGTDRKGYDLLHLVIEGAK
WTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFDSFTVIPTVMIAYFFLQSANAFGSGEETTTFFERASFQVVL
LVLLVMPVIALYVAKEVRKLRTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVHPWIPLVPITFFGLTIFSGNMIVKSIEEAMMKVRLGGEIKKEVVEEEQSA
VQSKEELFTFKHTM
>Mature_334_residues
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQFLLGTDRKGYDLLHLVIEGAK
WTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFDSFTVIPTVMIAYFFLQSANAFGSGEETTTFFERASFQVVL
LVLLVMPVIALYVAKEVRKLRTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVHPWIPLVPITFFGLTIFSGNMIVKSIEEAMMKVRLGGEIKKEVVEEEQSA
VQSKEELFTFKHTM

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yliabcd; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38176; Mature: 38176

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQF
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHH
LLGTDRKGYDLLHLVIEGAKWTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFD
EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFTVIPTVMIAYFFLQSANAFGSGEETTTFFERASFQVVLLVLLVMPVIALYVAKEVRKL
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
HHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVHPWIPLVPITFFGLTIFSGNMIVKSIEEAM
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
MKVRLGGEIKKEVVEEEQSAVQSKEELFTFKHTM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWTYIKRDKRFWISIGFLLLLVLLSIGNTLWNDGHIRQVTLQYDADENPQVPPFPPSLQF
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHH
LLGTDRKGYDLLHLVIEGAKWTIGISILIAALRMVIGVFFGVVLGTYIKRGFSKIEAFFD
EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFTVIPTVMIAYFFLQSANAFGSGEETTTFFERASFQVVLLVLLVMPVIALYVAKEVRKL
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTEEFVDAARILGGSRRHIVIKHLFPHLYMTFILVFFQQFTQTLTILLHLGLLEIFFGGT
HHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VKFLGPIEEIESYTHEWSGLIGVYFRSLTVHPWIPLVPITFFGLTIFSGNMIVKSIEEAM
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
MKVRLGGEIKKEVVEEEQSAVQSKEELFTFKHTM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA