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The map label for this gene is ywaF [H]

Identifier: 218234792

GI number: 218234792

Start: 825422

End: 826171

Strand: Direct

Name: ywaF [H]

Synonym: BCB4264_A0853

Alternate gene names: 218234792

Gene position: 825422-826171 (Clockwise)

Preceding gene: 218231532

Following gene: 218231914

Centisome position: 15.23

GC content: 36.0

Gene sequence:

>750_bases
ATGGAGGAAAGGAGGAAGGAAGATTATTTTAGCGCACACCCATTAAAACCATTTATTCCATACTCAAGGCAACATGCCCT
TATATTATTTATTATGTTGGTGGGGATATTTTTTCTGTATCAATACCAAGATGTATTACGTCAAAGTGAGTGGAATATAA
CGGTTCGATATGCCATTGCATTTTTATTTATAGGTAGTGAAATTGGGCTTCATATGTGGGAGTGGAAAGCGGGGATTTTT
GAGCTAGCTACTTCATTACCGTTTGAATTATGTACGATTAGTTTATTATTAGCGTCGATTATGATCGTAACGAAAAGTTA
CCGCATATATGAGATTGTATTTTTCACGGGAATTATTGGTGCATCACAAGCTATTTTAACGCCAAACTTGCAGTATGCTT
TTCCGCATTTTCGTTTCATTGAATATTTTATCGCGCATATATTGCTCATTTGGGCACCACTCTTTATGACTTGGGTGGAA
GGCTATAGACCGACCTTGCAATCTATTAAGCGTACGATGATATTTTTAAACATATTGATTCCGCTTGTTTCGTTTGTGAA
TTATAAAACAGGCGGTAATTATATGTTTTTAGCTCATAAGCCAGAAACAGCTTCACTACTCGATATGTTAGGACCGCATC
CTTACTATATTATTTCATTAGAACTCGCAGCACTTATTGGGTGTTTTATTTTGTATATGGCGTTTGCAAAAAGAGAAAGG
CATGCGCATAAAGAATCACTAGGATCATAA

Upstream 100 bases:

>100_bases
TTACAGTTTTGTAAGGTATGAATATGTAAATGTAAGGTAGAGGTTGTCCTAGTGTAAGCAAATGAATTGACTCGTCGTTT
CTTTCTTACAATAATATTGT

Downstream 100 bases:

>100_bases
CCTAGTGATTTTTTGTGTTTGAATATTTACAATTCAGAAAATTAAGAATAAAATTAGAGAGTAAAATATAAAGAGAGAGA
AGGGAAAACGTGGTCAAAAA

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MEERRKEDYFSAHPLKPFIPYSRQHALILFIMLVGIFFLYQYQDVLRQSEWNITVRYAIAFLFIGSEIGLHMWEWKAGIF
ELATSLPFELCTISLLLASIMIVTKSYRIYEIVFFTGIIGASQAILTPNLQYAFPHFRFIEYFIAHILLIWAPLFMTWVE
GYRPTLQSIKRTMIFLNILIPLVSFVNYKTGGNYMFLAHKPETASLLDMLGPHPYYIISLELAALIGCFILYMAFAKRER
HAHKESLGS

Sequences:

>Translated_249_residues
MEERRKEDYFSAHPLKPFIPYSRQHALILFIMLVGIFFLYQYQDVLRQSEWNITVRYAIAFLFIGSEIGLHMWEWKAGIF
ELATSLPFELCTISLLLASIMIVTKSYRIYEIVFFTGIIGASQAILTPNLQYAFPHFRFIEYFIAHILLIWAPLFMTWVE
GYRPTLQSIKRTMIFLNILIPLVSFVNYKTGGNYMFLAHKPETASLLDMLGPHPYYIISLELAALIGCFILYMAFAKRER
HAHKESLGS
>Mature_249_residues
MEERRKEDYFSAHPLKPFIPYSRQHALILFIMLVGIFFLYQYQDVLRQSEWNITVRYAIAFLFIGSEIGLHMWEWKAGIF
ELATSLPFELCTISLLLASIMIVTKSYRIYEIVFFTGIIGASQAILTPNLQYAFPHFRFIEYFIAHILLIWAPLFMTWVE
GYRPTLQSIKRTMIFLNILIPLVSFVNYKTGGNYMFLAHKPETASLLDMLGPHPYYIISLELAALIGCFILYMAFAKRER
HAHKESLGS

Specific function: Unknown

COG id: COG5522

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011737 [H]

Pfam domain/function: PF09529 Intg_mem_TP0381 [H]

EC number: NA

Molecular weight: Translated: 29045; Mature: 29045

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEERRKEDYFSAHPLKPFIPYSRQHALILFIMLVGIFFLYQYQDVLRQSEWNITVRYAIA
CCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FLFIGSEIGLHMWEWKAGIFELATSLPFELCTISLLLASIMIVTKSYRIYEIVFFTGIIG
HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ASQAILTPNLQYAFPHFRFIEYFIAHILLIWAPLFMTWVEGYRPTLQSIKRTMIFLNILI
CCCHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
PLVSFVNYKTGGNYMFLAHKPETASLLDMLGPHPYYIISLELAALIGCFILYMAFAKRER
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
HAHKESLGS
HHHHHHCCC
>Mature Secondary Structure
MEERRKEDYFSAHPLKPFIPYSRQHALILFIMLVGIFFLYQYQDVLRQSEWNITVRYAIA
CCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FLFIGSEIGLHMWEWKAGIFELATSLPFELCTISLLLASIMIVTKSYRIYEIVFFTGIIG
HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ASQAILTPNLQYAFPHFRFIEYFIAHILLIWAPLFMTWVEGYRPTLQSIKRTMIFLNILI
CCCHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
PLVSFVNYKTGGNYMFLAHKPETASLLDMLGPHPYYIISLELAALIGCFILYMAFAKRER
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
HAHKESLGS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1806041; 7934828; 9384377 [H]