| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is resA [H]
Identifier: 21675042
GI number: 21675042
Start: 2097012
End: 2097548
Strand: Reverse
Name: resA [H]
Synonym: CT2233
Alternate gene names: 21675042
Gene position: 2097548-2097012 (Counterclockwise)
Preceding gene: 21675047
Following gene: 21675041
Centisome position: 97.34
GC content: 58.47
Gene sequence:
>537_bases ATGAAAAGACTCGCGTCCCCCTTCGCCCCCTTCGTGGCTGCACTCATGGTTTTTTCGCTCTCACTGGCCTTCAGCGCGCA GGCTGACGCCAGACCGACACCCGCCCCCTCCTTTTCCGGAGTGACCGTTGACGGCAAACCCTTCTCCTCGGCCTCCCTCA AGGGCAAGGCCTACATTGTCAACTTCTTCGCCACCTGGTGCCCGCCCTGCCGGTCGGAGATTCCCGATATGGTGCAGGTG CAGAAAACCTGGGCCTCCAGAGGCTTTACCTTTGTCGGCATTGCGGTCAACGAGCAGCTTCCGAATGTGAAGAATTACAT GAAAACCCAGGGCATCATCTACCCGGTGATGATGGCCACTCCCGAGCTGATCCGGGCCTTCAACGGCTACATTGACGGCG GCATCACCGGCATTCCGACCTCGTTTGTCATCGATGCCTCCGGCAATGTTTCTGGTGTGATCGTCGGGCCGAGAAGCAAG GCGGATTTTGACCGGATCGTCAAAATGGCGCTCGGCGCAAAGGCGGCTACAAAATGA
Upstream 100 bases:
>100_bases AAGAGGAAAAGCCTGGGATTCCTATATTGAAGTTTAGAACTATTTGTCGCTGACGAACATTGATTCGGACTAGATTACCA TAATAATCAAAAGAAATGTT
Downstream 100 bases:
>100_bases CCCAGCTTTCTGTGTAACCAGAGAGTCAACATGGCTGACTTCCGATGCCTCGGGGGAATTTCCTGCCGGGGCGTGCTTTT TTAACGCTATTTCTCTGCAT
Product: thiol:disulfide interchange protein, thioredoxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKRLASPFAPFVAALMVFSLSLAFSAQADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQV QKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSK ADFDRIVKMALGAKAATK
Sequences:
>Translated_178_residues MKRLASPFAPFVAALMVFSLSLAFSAQADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQV QKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSK ADFDRIVKMALGAKAATK >Mature_178_residues MKRLASPFAPFVAALMVFSLSLAFSAQADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQV QKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSK ADFDRIVKMALGAKAATK
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 18991; Mature: 18991
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLASPFAPFVAALMVFSLSLAFSAQADARPTPAPSFSGVTVDGKPFSSASLKGKAYIV CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEE NFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMAT EEHHHCCCCHHHHCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCEEHHHHCC PELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKAATK HHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRLASPFAPFVAALMVFSLSLAFSAQADARPTPAPSFSGVTVDGKPFSSASLKGKAYIV CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEE NFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMAT EEHHHCCCCHHHHCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCEEHHHHCC PELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKAATK HHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA