| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21675025
Identifier: 21675025
GI number: 21675025
Start: 2085334
End: 2085915
Strand: Reverse
Name: 21675025
Synonym: CT2216
Alternate gene names: NA
Gene position: 2085915-2085334 (Counterclockwise)
Preceding gene: 21675028
Following gene: 21675024
Centisome position: 96.8
GC content: 53.26
Gene sequence:
>582_bases TTGATTTTATTATCCAACGAAAAAATGGTTGCCATGATGAAGAGAGTACATTTGATGCGGGCGCTGCTGATTGCTTTGGC GGCGGTGACAATGCTTTTTGGAACGGCTCGTGCGGGCTGGGATCCGGCTGACGAGGTTAATGCCGAGCGGACAATAGGGA TGTTCAGGAAAGCTGATCCGTCTCTTGAGCGTTTCTTTTCAAAGGCTTATGGTTATGCGGTTTTTTCTGATATCTACAAG GGCGGGTTCATGATCGTCGGCGGCGGTCACGGCAAAGGGGTGGTTTTCGATCAGGGACGGCCCATTGGCCATGCGACTGT GACGATGTTCAATGTTGGGCCTCAGCTCGGCGGACAATCATTTTCCGAGATCATTTTCTTCAAGGACCGGGCGGCGCTTG CTGACTTCACCAAAGGCAATTACGAGCTGAGCGCTCAGTTTGCTGTTGTTGCCGTCAGGGCCGGCATGGCCACCAATACC GACTACTCGAACGGCGTGGCCGTTTTTGCCATGCCTAACGCGGGCTTGATGGGAGAACTCACTGTTGGCGCCCAGAAGTT CACTTTCAGGCAGTACCGGTGA
Upstream 100 bases:
>100_bases CAATTGATTTTTCGGTTTTTTACGCTCTGACGCGATCCGGGTTTTCAGGCTGGAAAATCGTACATTATAAGCTGGTGTTG CGTTGCAACTTTTTGCCGGT
Downstream 100 bases:
>100_bases TTCGACCGGCATTCGACAAGGTTTTTATCACTATCTCATTTTCTGATGAACTATGAAATTGTCGTGGGCCTCGAGGTCCA CTGTCAGCTCAATACCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADPSLERFFSKAYGYAVFSDIYK GGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQSFSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNT DYSNGVAVFAMPNAGLMGELTVGAQKFTFRQYR
Sequences:
>Translated_193_residues MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADPSLERFFSKAYGYAVFSDIYK GGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQSFSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNT DYSNGVAVFAMPNAGLMGELTVGAQKFTFRQYR >Mature_193_residues MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADPSLERFFSKAYGYAVFSDIYK GGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQSFSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNT DYSNGVAVFAMPNAGLMGELTVGAQKFTFRQYR
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20976; Mature: 20976
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADP CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCH SLERFFSKAYGYAVFSDIYKGGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQS HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCC FSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNTDYSNGVAVFAMPNAGLMGEL HHHEEEEECCHHHHHCCCCCEEEEHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEE TVGAQKFTFRQYR ECCCCCCEEECCC >Mature Secondary Structure MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADP CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCH SLERFFSKAYGYAVFSDIYKGGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQS HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCC FSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNTDYSNGVAVFAMPNAGLMGEL HHHEEEEECCHHHHHCCCCCEEEEHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEE TVGAQKFTFRQYR ECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA