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The map label for this gene is hdrB [H]

Identifier: 21674850

GI number: 21674850

Start: 1938292

End: 1939143

Strand: Reverse

Name: hdrB [H]

Synonym: CT2040

Alternate gene names: 21674850

Gene position: 1939143-1938292 (Counterclockwise)

Preceding gene: 21674851

Following gene: 21674849

Centisome position: 89.99

GC content: 56.1

Gene sequence:

>852_bases
ATGAAGCGTTACGCCTACTATCAGAGCTGCATCAATGAAGCGATGACCAAAGAGGTCGATCGGTCGCTTGGCCTCTGGCA
GCATGATCTTGGCATTGAAATGGTCAAGTTGCATGAAAGCGTTTGCTGTGGCGGCAGCAATCTCGACTACGTGAGCCCGA
AGCAGTTCGCGCTGGTCAACGCCCGCAATATTGCCCTGGCCGAAAAGCAGGGGCTTGATCTGGTTGTCTCCTGCAATACC
TGCTTGATGACCATCAGAACAGCCAAAAAGAAGCTTGACGAGTCACCTGCACTGCGAGCTGAAGTCAACGAGATTCTCAA
GGAGGAGGGCCTTGAATATCGCGGGACCTCCGATGTGCGCCATCTGCTCTGGGTGCTCATCGACGACGTCGGTCTCGATG
TCATTCGCAAGAAGGTGAAAACACCGCTCACCAAACTCCGTATTGCGCCGTTTTATGGTTGTCATATCCTGCGTCCTTCG
ACCGTGCTCGGCAAGGACGATCCGCTCGAACCGACCTCTCTCGATCTTTTGCTCGACGCTCTGGGCGCAAAGACGATTCC
TTACGAGCACAAGAACCGCTGCTGTGGCTTCCACACACTGCTGGTCGCCGAGGAGGAGTCGCTGAACGTGGCTGCCGAGG
CGCTGAAGGAGGCGATGGACAAGAAGGCTGACTTTATCGTGACGCCCTGCCCTCTCTGCCACACCGTGCTGGACGGGTAT
CAGGCCAAGGCGCTCAAGCATAATGGCCTCAAGGGGGCGATTCCGGTCTATCATCTCTCCGAAGTTGTGGGTCTTGCGCT
CGGGTACTCCGACCGGCAACTCGGCATCAAACGGCATATCGTTACAGCCTGA

Upstream 100 bases:

>100_bases
TCAAGGCGTCCAAGGGCATTCAGTCCCTGCGCAAGGAGATGAAGGAGATGGCCAGCCATATAACGAAGGATCACGAAAAA
AAATCCGGAGAATAAGCAGT

Downstream 100 bases:

>100_bases
TTGATCAGCTTTTACGGGCGCCACGAGAAGGGCGCCCGCCTGTTTTAAAATCCGGCTGAAAAAGTGTACCTTTGCACCTG
ATTTATTTAATGTCTGCAAG

Product: succinate/fumarate oxidoreductase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKRYAYYQSCINEAMTKEVDRSLGLWQHDLGIEMVKLHESVCCGGSNLDYVSPKQFALVNARNIALAEKQGLDLVVSCNT
CLMTIRTAKKKLDESPALRAEVNEILKEEGLEYRGTSDVRHLLWVLIDDVGLDVIRKKVKTPLTKLRIAPFYGCHILRPS
TVLGKDDPLEPTSLDLLLDALGAKTIPYEHKNRCCGFHTLLVAEEESLNVAAEALKEAMDKKADFIVTPCPLCHTVLDGY
QAKALKHNGLKGAIPVYHLSEVVGLALGYSDRQLGIKRHIVTA

Sequences:

>Translated_283_residues
MKRYAYYQSCINEAMTKEVDRSLGLWQHDLGIEMVKLHESVCCGGSNLDYVSPKQFALVNARNIALAEKQGLDLVVSCNT
CLMTIRTAKKKLDESPALRAEVNEILKEEGLEYRGTSDVRHLLWVLIDDVGLDVIRKKVKTPLTKLRIAPFYGCHILRPS
TVLGKDDPLEPTSLDLLLDALGAKTIPYEHKNRCCGFHTLLVAEEESLNVAAEALKEAMDKKADFIVTPCPLCHTVLDGY
QAKALKHNGLKGAIPVYHLSEVVGLALGYSDRQLGIKRHIVTA
>Mature_283_residues
MKRYAYYQSCINEAMTKEVDRSLGLWQHDLGIEMVKLHESVCCGGSNLDYVSPKQFALVNARNIALAEKQGLDLVVSCNT
CLMTIRTAKKKLDESPALRAEVNEILKEEGLEYRGTSDVRHLLWVLIDDVGLDVIRKKVKTPLTKLRIAPFYGCHILRPS
TVLGKDDPLEPTSLDLLLDALGAKTIPYEHKNRCCGFHTLLVAEEESLNVAAEALKEAMDKKADFIVTPCPLCHTVLDGY
QAKALKHNGLKGAIPVYHLSEVVGLALGYSDRQLGIKRHIVTA

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31423; Mature: 31423

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYAYYQSCINEAMTKEVDRSLGLWQHDLGIEMVKLHESVCCGGSNLDYVSPKQFALVN
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
ARNIALAEKQGLDLVVSCNTCLMTIRTAKKKLDESPALRAEVNEILKEEGLEYRGTSDVR
CCCEEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHH
HLLWVLIDDVGLDVIRKKVKTPLTKLRIAPFYGCHILRPSTVLGKDDPLEPTSLDLLLDA
HHHHHHHHHHCHHHHHHHHHCCHHHEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
LGAKTIPYEHKNRCCGFHTLLVAEEESLNVAAEALKEAMDKKADFIVTPCPLCHTVLDGY
HCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCH
QAKALKHNGLKGAIPVYHLSEVVGLALGYSDRQLGIKRHIVTA
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCHHHHCCCC
>Mature Secondary Structure
MKRYAYYQSCINEAMTKEVDRSLGLWQHDLGIEMVKLHESVCCGGSNLDYVSPKQFALVN
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
ARNIALAEKQGLDLVVSCNTCLMTIRTAKKKLDESPALRAEVNEILKEEGLEYRGTSDVR
CCCEEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHH
HLLWVLIDDVGLDVIRKKVKTPLTKLRIAPFYGCHILRPSTVLGKDDPLEPTSLDLLLDA
HHHHHHHHHHCHHHHHHHHHCCHHHEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
LGAKTIPYEHKNRCCGFHTLLVAEEESLNVAAEALKEAMDKKADFIVTPCPLCHTVLDGY
HCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCH
QAKALKHNGLKGAIPVYHLSEVVGLALGYSDRQLGIKRHIVTA
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]