| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674584
Identifier: 21674584
GI number: 21674584
Start: 1676600
End: 1677109
Strand: Reverse
Name: 21674584
Synonym: CT1770
Alternate gene names: NA
Gene position: 1677109-1676600 (Counterclockwise)
Preceding gene: 21674585
Following gene: 21674577
Centisome position: 77.83
GC content: 55.29
Gene sequence:
>510_bases ATGCGCAAGACGACCGGAACTCTTTTCGTGCTTCTTACACTTGTGACGCTCATTTTGCAGGGATGCTACAGCTTTTCTGG CGGAGCGCTTCCCCCGCATTTGCACACGGTCGCCGTGCCGCTGTTCGATGACACCACACAGGCCGGTATTGCGGAGTTCA GGGAGGGCATTACCCGAAGTCTCATCAACAAGATCGAATCGCAGAGTACGCTTTCGATCGAGCCAGATCCATCACGCGCC GATGCGGTGCTGAAGGGCGCAATCGTCTCCTACAGCGACGAACCAAGCCAGCTCGGCAGCGCTACGGAGCGAGCAGTGAC CAACCGGATCACCATTGTGCTGCAAGCTGATTTCGACGACCAAGTCAAAAACAGCAAGCTCTTCTCGCAAACCTTCGTCG GCTTCGCCGATTACCAGACCGGAAATTACACCGCTCAGCAAACCGCTATCCAGAGCGCCTACAACATGGCCTTAGACGAC CTGTTCAATCAGATGATCTCGAACTGGTGA
Upstream 100 bases:
>100_bases CCGCGCTTGACGGAAAACGCAAGAAGATGATGCTTCTGAGCTATCCGTTTCGTAAACTGTTCAACAGAATCGACCGGCAA ACTTATTAATCACGACAGCC
Downstream 100 bases:
>100_bases GAAGAGCATTATGAATTATGAATGCTGAATGATGAATTGAAGAGGGGGTGGCGGGTTTTTGCCAGATCGGTCGGATCAGT CCGATTCGTCTGATCTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRKTTGTLFVLLTLVTLILQGCYSFSGGALPPHLHTVAVPLFDDTTQAGIAEFREGITRSLINKIESQSTLSIEPDPSRA DAVLKGAIVSYSDEPSQLGSATERAVTNRITIVLQADFDDQVKNSKLFSQTFVGFADYQTGNYTAQQTAIQSAYNMALDD LFNQMISNW
Sequences:
>Translated_169_residues MRKTTGTLFVLLTLVTLILQGCYSFSGGALPPHLHTVAVPLFDDTTQAGIAEFREGITRSLINKIESQSTLSIEPDPSRA DAVLKGAIVSYSDEPSQLGSATERAVTNRITIVLQADFDDQVKNSKLFSQTFVGFADYQTGNYTAQQTAIQSAYNMALDD LFNQMISNW >Mature_169_residues MRKTTGTLFVLLTLVTLILQGCYSFSGGALPPHLHTVAVPLFDDTTQAGIAEFREGITRSLINKIESQSTLSIEPDPSRA DAVLKGAIVSYSDEPSQLGSATERAVTNRITIVLQADFDDQVKNSKLFSQTFVGFADYQTGNYTAQQTAIQSAYNMALDD LFNQMISNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18475; Mature: 18475
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTTGTLFVLLTLVTLILQGCYSFSGGALPPHLHTVAVPLFDDTTQAGIAEFREGITRS CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHH LINKIESQSTLSIEPDPSRADAVLKGAIVSYSDEPSQLGSATERAVTNRITIVLQADFDD HHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEECCCCH QVKNSKLFSQTFVGFADYQTGNYTAQQTAIQSAYNMALDDLFNQMISNW HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKTTGTLFVLLTLVTLILQGCYSFSGGALPPHLHTVAVPLFDDTTQAGIAEFREGITRS CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHH LINKIESQSTLSIEPDPSRADAVLKGAIVSYSDEPSQLGSATERAVTNRITIVLQADFDD HHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEECCCCH QVKNSKLFSQTFVGFADYQTGNYTAQQTAIQSAYNMALDDLFNQMISNW HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA