| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is nirE [H]
Identifier: 21674577
GI number: 21674577
Start: 1672766
End: 1673668
Strand: Reverse
Name: nirE [H]
Synonym: CT1763
Alternate gene names: 21674577
Gene position: 1673668-1672766 (Counterclockwise)
Preceding gene: 21674584
Following gene: 21674576
Centisome position: 77.67
GC content: 62.02
Gene sequence:
>903_bases ATGGTGAAGATGTCGCAAATTCTGACAAGAAAAGTACTTCACCTCTTTTTTTGTCAGGCGTTATATTTTTTAGGAAATAA TGAAAGCCGTAAAGTGATTCATCAGATGGCGGAGCATGGAGAAAACAGGGTTCTGATTGTCGGCGCGGGGCCGGGCGATC CGGAGCTGCTGACGGTGCGCGGCGCGGCGGCCATCCGCGAGGCCGATGTCATTCTCTACGACTGCGGGACGGTCGAGCCG GTACTCGCGCTGGCATCCGAACGCGCCGCGATTGTTCGCGTGGATCGTTCGCCATATGAAACCGGCGAGGGGCGTCGCGA ACAGACGCCGATGATCGTGGTGATTCGGGAGTATCGTGATCGTGGCTTGCGCGTCGTGCGGCTGAAAACCGGCGATCCGT CGCTGTTCGGCGGCGAAGTTGATGAGGGCGACGTGCTCACGCGGCTCGGCATTCCGTGGGCCGCTATTCCCGGCATCTGT GCCGGAGCGGCGGCGGCGAGCGCCTACGCCCTGCCGATCAGCCGCAAGTTCGAGAGCGACGCCGTGCTCAACCTCATCGC CGCCGCGATCACCGACGACTTCGCGCTCATCCGCGATGCCGCACACTTGCTCGGCCATGGCGCGACGGTCGTGCTCTACA TGGCGACGGCGAATCTGCCGGGTATCCTCCGGACTTTTCGTGAAGCGGGCGTGCCTGATGCAATGCCGGTCGTGGCGGTG AGCAAGGCCGGATGGCCGGATGAGGCGTTTGCGCGGACGACTCTTGGCGAGCTAACGGCGGCTGGTTGTTCGATCGCCCT GCCGGAGCCGGTGGTGTACCATATCGGGCGGTACGTGAGAGTTCGGAACGTTCCTGCGGGATCGCAAGAGTTTTTTGTCA AGGCCCCCGAAAACGCCGGGTAG
Upstream 100 bases:
>100_bases TCTTTTACGGCAATGGATGAGATTAAGAAACCTTAATTTTTTAATAAGAAAAGCTGTTTTCTGTAAATTTATATACCAAT AGGTAGGAATTGTTTGAATA
Downstream 100 bases:
>100_bases CCCCTTTTTTTGTACAGCATTATATATTAAGAGTTATAACGAAATCAACCATATCCATGAAGAAAGCAGTATTGATGGTG TTGCTGCTGGCCGCGGTCAG
Product: uroporphyrin-III C-methyltransferase
Products: NA
Alternate protein names: Urogen III methylase; SUMT; Uroporphyrinogen III methylase; UROM [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MVKMSQILTRKVLHLFFCQALYFLGNNESRKVIHQMAEHGENRVLIVGAGPGDPELLTVRGAAAIREADVILYDCGTVEP VLALASERAAIVRVDRSPYETGEGRREQTPMIVVIREYRDRGLRVVRLKTGDPSLFGGEVDEGDVLTRLGIPWAAIPGIC AGAAAASAYALPISRKFESDAVLNLIAAAITDDFALIRDAAHLLGHGATVVLYMATANLPGILRTFREAGVPDAMPVVAV SKAGWPDEAFARTTLGELTAAGCSIALPEPVVYHIGRYVRVRNVPAGSQEFFVKAPENAG
Sequences:
>Translated_300_residues MVKMSQILTRKVLHLFFCQALYFLGNNESRKVIHQMAEHGENRVLIVGAGPGDPELLTVRGAAAIREADVILYDCGTVEP VLALASERAAIVRVDRSPYETGEGRREQTPMIVVIREYRDRGLRVVRLKTGDPSLFGGEVDEGDVLTRLGIPWAAIPGIC AGAAAASAYALPISRKFESDAVLNLIAAAITDDFALIRDAAHLLGHGATVVLYMATANLPGILRTFREAGVPDAMPVVAV SKAGWPDEAFARTTLGELTAAGCSIALPEPVVYHIGRYVRVRNVPAGSQEFFVKAPENAG >Mature_300_residues MVKMSQILTRKVLHLFFCQALYFLGNNESRKVIHQMAEHGENRVLIVGAGPGDPELLTVRGAAAIREADVILYDCGTVEP VLALASERAAIVRVDRSPYETGEGRREQTPMIVVIREYRDRGLRVVRLKTGDPSLFGGEVDEGDVLTRLGIPWAAIPGIC AGAAAASAYALPISRKFESDAVLNLIAAAITDDFALIRDAAHLLGHGATVVLYMATANLPGILRTFREAGVPDAMPVVAV SKAGWPDEAFARTTLGELTAAGCSIALPEPVVYHIGRYVRVRNVPAGSQEFFVKAPENAG
Specific function: Catalyzes the methylation of both C-2 and C-7 of uroporphyrinogen III leading to precorrin-1 and precorrin-2; their oxidative esterification gives respectively factor I octamethyl ester and sirohydrochlorin. Inactivation of uroporphyrinogen-III methyltran
COG id: COG0007
COG function: function code H; Uroporphyrinogen-III methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789768, Length=268, Percent_Identity=30.5970149253731, Blast_Score=99, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6322922, Length=244, Percent_Identity=27.0491803278689, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006366 - InterPro: IPR003043 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.107 [H]
Molecular weight: Translated: 32199; Mature: 32199
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00839 SUMT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKMSQILTRKVLHLFFCQALYFLGNNESRKVIHQMAEHGENRVLIVGAGPGDPELLTVR CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEE GAAAIREADVILYDCGTVEPVLALASERAAIVRVDRSPYETGEGRREQTPMIVVIREYRD CCHHHEECCEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHH RGLRVVRLKTGDPSLFGGEVDEGDVLTRLGIPWAAIPGICAGAAAASAYALPISRKFESD CCEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCEEECCCCCCCCHH AVLNLIAAAITDDFALIRDAAHLLGHGATVVLYMATANLPGILRTFREAGVPDAMPVVAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEE SKAGWPDEAFARTTLGELTAAGCSIALPEPVVYHIGRYVRVRNVPAGSQEFFVKAPENAG ECCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHCCCEEEEECCCCCCCEEEEECCCCCC >Mature Secondary Structure MVKMSQILTRKVLHLFFCQALYFLGNNESRKVIHQMAEHGENRVLIVGAGPGDPELLTVR CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEE GAAAIREADVILYDCGTVEPVLALASERAAIVRVDRSPYETGEGRREQTPMIVVIREYRD CCHHHEECCEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHH RGLRVVRLKTGDPSLFGGEVDEGDVLTRLGIPWAAIPGICAGAAAASAYALPISRKFESD CCEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCEEECCCCCCCCHH AVLNLIAAAITDDFALIRDAAHLLGHGATVVLYMATANLPGILRTFREAGVPDAMPVVAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEE SKAGWPDEAFARTTLGELTAAGCSIALPEPVVYHIGRYVRVRNVPAGSQEFFVKAPENAG ECCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHCCCEEEEECCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7747927 [H]