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The map label for this gene is cirA [C]

Identifier: 21674576

GI number: 21674576

Start: 1670691

End: 1672709

Strand: Reverse

Name: cirA [C]

Synonym: CT1762

Alternate gene names: 21674576

Gene position: 1672709-1670691 (Counterclockwise)

Preceding gene: 21674577

Following gene: 21674575

Centisome position: 77.62

GC content: 57.85

Gene sequence:

>2019_bases
ATGAAGAAAGCAGTATTGATGGTGTTGCTGCTGGCCGCGGTCAGGCCGGCAATTGCAGCCGAAACCATTGCATCGAGCGA
CCAGAGCGCCACGCCGGTTTTCACGGCGGGCGAGATCGTCGTCACGGGCAAGAGTGCCAACTCCTCCGAAACGGTTCCCG
CCGCCGAGATGGAAATGCTCGACAAGCAGAATCTCTCCGAAGCCGCCGATCTTCTGCCGGGCGTCACGATCAGTAATGTC
GGCGGGCGCAATGAAGGGATGATCTACGTGCGCGGCTTCGACATGCGCCAGGTGCCGCTCTACCTCGACGGCGTTCCGCT
CTACGTGCCGTACGACGGCTATGTCGATCCGAACCGCTTTTTGACGATGAACCTGTCGGAAGTCAGCGTTTCCAAAGGCT
TCACCTCGGTGCTGTACGGCCCGAACACGCTTGGCGGCGCGATCAACATGGTCAGCCGCAAGCCGGAAAAAAAGCTTGAA
GGCAACGTTAGCGCTGGCGGATCGATGGGCAACGACGAGATCGACGCCGGATTTGAAAGCGTCAACATCGGCTCGAATCA
GGGCAAGTGGTACGTGCAGGCCGGGCTTTCCGTGCTGAGTCGCGACTTCATGCCACTCTCCTCCTCGTTTGAACCTGTCG
CGAACGAAGACGGCGGCGAGCGTGGCAACTCCGATACCCGTGACCGGAACGCCACGATCAAAATCGGTTACACACCCAAC
AGCACGGACGAGTACTCCATCACCCTCAACAGCCAGCACTCGGTCAAGGGCGTGCCGCTTTATACCGGATCGAATCCGAA
CAACAAGAGCCGCTTCTGGCGCTTCACCAACTGGGACAAAACCAGCCTGTACTACATCGGCCGCACCAGCCTCGGCGAGA
AGAGCTACCTGAAAACGCGGGCCTATTTCGATAATTATTACAACACGCTCGAAAGCTACGATGACGCTACCTACACCACT
CAGCATAGCAATAAAGCTTTTTCGAGCCGCTATGATGACCACACGGTCGGCGGTTCGGTGGAGTTCGGCACCAGCATCGC
GCAGAGCGACATCCTCAAAGTCGCGCTGCACGACAAGTACGACATGCACAACGAAATCGGTAACACCGGCGAGGAGCCGC
TGAAGTTCGCGGACAACACCTTCTCGATTGCCGTCGAGAACACCTGGAATGCCTCGAAAAATCTCACGCTCATCGCCGGT
GTCCGTCAGGATTTCCGCTCCACCATCGAGGCGCAGGAGTTCACCGACAACACTCATACGGCCATCCATTCGTTCGATCT
CGAAGACAACCGGGCAGCCAACGCGCAGCTCGCCATGGTCGGGCATCTGGACGCCTGCAACACGCTGACCAGCTATGTGG
CGCGGACGACGCGCTTTCCCACGCTGAAGGATCGCTACTCCTACCGGATGGGCAGGGCGATTGCCAACCCCGGCCTCGAT
CCTGAACAGAGCCTGAACTACGGTCTCGATTACGCTTTTACACCCTCCGGAAAATTTTCGCTTCACGCGTCGGTTTACCG
GAGCAAGCTCGACGACACCATCCAGCAGGTCAACAATGTCGCCTATGATACGGCGACCAGCACCTGGCTCTGGCAGATGC
AGAATACCGGCAAGTCAACCTTCACCGGCTTCGAATATTCAATGGACTGGCAGCCGGAAGCGTGGCTGAAAGCGCATGTG
GCCTACAGTTACATCGACCGGCAGAACGACAGCAATCCCGATCTGGTCTTTACCGATGTGCCGAAGCACAAGCTCAATGG
CTCCGTGCAGTTCCTGTTGAACAAGGAGACCTGGGTGCTTGTCGAGAGCGAATACAACACGAAGCGTTACAGCACCAGCG
ACGGGAAGTACACGGCATCGCCTTATGGCCTCCTGAATCTGCACATAAACGCCGGGCTGACCGACGCGCTCTCGCTTCAT
GCGGCGGTCAACAATCTCTTCGACCGCAACTACGAGGTCGCGGAGGGGTATCCGGAAGCCGGGCGCGAGTATATCGCGTC
GATGAATTACGCATTCTGA

Upstream 100 bases:

>100_bases
GATCGCAAGAGTTTTTTGTCAAGGCCCCCGAAAACGCCGGGTAGCCCCTTTTTTTGTACAGCATTATATATTAAGAGTTA
TAACGAAATCAACCATATCC

Downstream 100 bases:

>100_bases
GCAGCTCGATGAAAGGAGTACCGCTGATTCTCGTCTGCCTCTTCGCGCTTGGCGGCGCGAGCCTGCTCTCGCTCGGCGTG
GGGCGCTATCCTGTCTCGCC

Product: TonB-dependent outer membrane receptor, putative

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Enterobactin Receptor Protein; Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicins; Iron-Regulated Outer Membrane Virulence Protein; Outer Membrane Cobalamin Receptor Protein; Outer Membrane Receptor For Fe Transport; Outer Membrane Receptor Protein; NB Dependent Outer Membrane Receptor; NB-Like Outer Membrane Receptor Protein; Ferrienterochelin/Colicin Outer Membrane Receptor; Nb-Dependent Siderophore Receptor; Nb-Dependent Receptor; Iron Compound nB-Dependent Receptor; Outer Membrane Receptor Probably nB Dependent; TONB-Dependent Outer Membrane Receptor

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MKKAVLMVLLLAAVRPAIAAETIASSDQSATPVFTAGEIVVTGKSANSSETVPAAEMEMLDKQNLSEAADLLPGVTISNV
GGRNEGMIYVRGFDMRQVPLYLDGVPLYVPYDGYVDPNRFLTMNLSEVSVSKGFTSVLYGPNTLGGAINMVSRKPEKKLE
GNVSAGGSMGNDEIDAGFESVNIGSNQGKWYVQAGLSVLSRDFMPLSSSFEPVANEDGGERGNSDTRDRNATIKIGYTPN
STDEYSITLNSQHSVKGVPLYTGSNPNNKSRFWRFTNWDKTSLYYIGRTSLGEKSYLKTRAYFDNYYNTLESYDDATYTT
QHSNKAFSSRYDDHTVGGSVEFGTSIAQSDILKVALHDKYDMHNEIGNTGEEPLKFADNTFSIAVENTWNASKNLTLIAG
VRQDFRSTIEAQEFTDNTHTAIHSFDLEDNRAANAQLAMVGHLDACNTLTSYVARTTRFPTLKDRYSYRMGRAIANPGLD
PEQSLNYGLDYAFTPSGKFSLHASVYRSKLDDTIQQVNNVAYDTATSTWLWQMQNTGKSTFTGFEYSMDWQPEAWLKAHV
AYSYIDRQNDSNPDLVFTDVPKHKLNGSVQFLLNKETWVLVESEYNTKRYSTSDGKYTASPYGLLNLHINAGLTDALSLH
AAVNNLFDRNYEVAEGYPEAGREYIASMNYAF

Sequences:

>Translated_672_residues
MKKAVLMVLLLAAVRPAIAAETIASSDQSATPVFTAGEIVVTGKSANSSETVPAAEMEMLDKQNLSEAADLLPGVTISNV
GGRNEGMIYVRGFDMRQVPLYLDGVPLYVPYDGYVDPNRFLTMNLSEVSVSKGFTSVLYGPNTLGGAINMVSRKPEKKLE
GNVSAGGSMGNDEIDAGFESVNIGSNQGKWYVQAGLSVLSRDFMPLSSSFEPVANEDGGERGNSDTRDRNATIKIGYTPN
STDEYSITLNSQHSVKGVPLYTGSNPNNKSRFWRFTNWDKTSLYYIGRTSLGEKSYLKTRAYFDNYYNTLESYDDATYTT
QHSNKAFSSRYDDHTVGGSVEFGTSIAQSDILKVALHDKYDMHNEIGNTGEEPLKFADNTFSIAVENTWNASKNLTLIAG
VRQDFRSTIEAQEFTDNTHTAIHSFDLEDNRAANAQLAMVGHLDACNTLTSYVARTTRFPTLKDRYSYRMGRAIANPGLD
PEQSLNYGLDYAFTPSGKFSLHASVYRSKLDDTIQQVNNVAYDTATSTWLWQMQNTGKSTFTGFEYSMDWQPEAWLKAHV
AYSYIDRQNDSNPDLVFTDVPKHKLNGSVQFLLNKETWVLVESEYNTKRYSTSDGKYTASPYGLLNLHINAGLTDALSLH
AAVNNLFDRNYEVAEGYPEAGREYIASMNYAF
>Mature_672_residues
MKKAVLMVLLLAAVRPAIAAETIASSDQSATPVFTAGEIVVTGKSANSSETVPAAEMEMLDKQNLSEAADLLPGVTISNV
GGRNEGMIYVRGFDMRQVPLYLDGVPLYVPYDGYVDPNRFLTMNLSEVSVSKGFTSVLYGPNTLGGAINMVSRKPEKKLE
GNVSAGGSMGNDEIDAGFESVNIGSNQGKWYVQAGLSVLSRDFMPLSSSFEPVANEDGGERGNSDTRDRNATIKIGYTPN
STDEYSITLNSQHSVKGVPLYTGSNPNNKSRFWRFTNWDKTSLYYIGRTSLGEKSYLKTRAYFDNYYNTLESYDDATYTT
QHSNKAFSSRYDDHTVGGSVEFGTSIAQSDILKVALHDKYDMHNEIGNTGEEPLKFADNTFSIAVENTWNASKNLTLIAG
VRQDFRSTIEAQEFTDNTHTAIHSFDLEDNRAANAQLAMVGHLDACNTLTSYVARTTRFPTLKDRYSYRMGRAIANPGLD
PEQSLNYGLDYAFTPSGKFSLHASVYRSKLDDTIQQVNNVAYDTATSTWLWQMQNTGKSTFTGFEYSMDWQPEAWLKAHV
AYSYIDRQNDSNPDLVFTDVPKHKLNGSVQFLLNKETWVLVESEYNTKRYSTSDGKYTASPYGLLNLHINAGLTDALSLH
AAVNNLFDRNYEVAEGYPEAGREYIASMNYAF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788478, Length=710, Percent_Identity=22.112676056338, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74483; Mature: 74483

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAVLMVLLLAAVRPAIAAETIASSDQSATPVFTAGEIVVTGKSANSSETVPAAEMEML
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCCCCCCCCCHHHHHHH
DKQNLSEAADLLPGVTISNVGGRNEGMIYVRGFDMRQVPLYLDGVPLYVPYDGYVDPNRF
HHCCHHHHHHHCCCCEEECCCCCCCCEEEEECCCCEECCEEECCEEEEECCCCCCCCCCE
LTMNLSEVSVSKGFTSVLYGPNTLGGAINMVSRKPEKKLEGNVSAGGSMGNDEIDAGFES
EEEEHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHCCCCE
VNIGSNQGKWYVQAGLSVLSRDFMPLSSSFEPVANEDGGERGNSDTRDRNATIKIGYTPN
EECCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
STDEYSITLNSQHSVKGVPLYTGSNPNNKSRFWRFTNWDKTSLYYIGRTSLGEKSYLKTR
CCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHH
AYFDNYYNTLESYDDATYTTQHSNKAFSSRYDDHTVGGSVEFGTSIAQSDILKVALHDKY
HHHHHHHHHHHHCCCCCEEECCCCCHHHCCCCCCCCCCCEECCCHHHHHHHEEEEECCCH
DMHNEIGNTGEEPLKFADNTFSIAVENTWNASKNLTLIAGVRQDFRSTIEAQEFTDNTHT
HHHHHHCCCCCCCHHCCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCE
AIHSFDLEDNRAANAQLAMVGHLDACNTLTSYVARTTRFPTLKDRYSYRMGRAIANPGLD
EEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PEQSLNYGLDYAFTPSGKFSLHASVYRSKLDDTIQQVNNVAYDTATSTWLWQMQNTGKST
HHHHHCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCE
FTGFEYSMDWQPEAWLKAHVAYSYIDRQNDSNPDLVFTDVPKHKLNGSVQFLLNKETWVL
ECCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCCEEEEEEECCEEEE
VESEYNTKRYSTSDGKYTASPYGLLNLHINAGLTDALSLHAAVNNLFDRNYEVAEGYPEA
EECCCCCCEEECCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHCCCCHH
GREYIASMNYAF
HHHHHHHCCCCC
>Mature Secondary Structure
MKKAVLMVLLLAAVRPAIAAETIASSDQSATPVFTAGEIVVTGKSANSSETVPAAEMEML
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCCCCCCCCCHHHHHHH
DKQNLSEAADLLPGVTISNVGGRNEGMIYVRGFDMRQVPLYLDGVPLYVPYDGYVDPNRF
HHCCHHHHHHHCCCCEEECCCCCCCCEEEEECCCCEECCEEECCEEEEECCCCCCCCCCE
LTMNLSEVSVSKGFTSVLYGPNTLGGAINMVSRKPEKKLEGNVSAGGSMGNDEIDAGFES
EEEEHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHCCCCE
VNIGSNQGKWYVQAGLSVLSRDFMPLSSSFEPVANEDGGERGNSDTRDRNATIKIGYTPN
EECCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
STDEYSITLNSQHSVKGVPLYTGSNPNNKSRFWRFTNWDKTSLYYIGRTSLGEKSYLKTR
CCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHH
AYFDNYYNTLESYDDATYTTQHSNKAFSSRYDDHTVGGSVEFGTSIAQSDILKVALHDKY
HHHHHHHHHHHHCCCCCEEECCCCCHHHCCCCCCCCCCCEECCCHHHHHHHEEEEECCCH
DMHNEIGNTGEEPLKFADNTFSIAVENTWNASKNLTLIAGVRQDFRSTIEAQEFTDNTHT
HHHHHHCCCCCCCHHCCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCE
AIHSFDLEDNRAANAQLAMVGHLDACNTLTSYVARTTRFPTLKDRYSYRMGRAIANPGLD
EEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PEQSLNYGLDYAFTPSGKFSLHASVYRSKLDDTIQQVNNVAYDTATSTWLWQMQNTGKST
HHHHHCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCE
FTGFEYSMDWQPEAWLKAHVAYSYIDRQNDSNPDLVFTDVPKHKLNGSVQFLLNKETWVL
ECCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCCEEEEEEECCEEEE
VESEYNTKRYSTSDGKYTASPYGLLNLHINAGLTDALSLHAAVNNLFDRNYEVAEGYPEA
EECCCCCCEEECCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHCCCCHH
GREYIASMNYAF
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA