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The map label for this gene is 21674447

Identifier: 21674447

GI number: 21674447

Start: 1538026

End: 1539681

Strand: Reverse

Name: 21674447

Synonym: CT1629

Alternate gene names: NA

Gene position: 1539681-1538026 (Counterclockwise)

Preceding gene: 21674448

Following gene: 21674445

Centisome position: 71.45

GC content: 54.95

Gene sequence:

>1656_bases
ATGGCGTCGGTCAGCGGTAACAGCACTGCGCCGGACTCCGCCGCTGTTGTGACCGTACAAGACCCCCTTTCTGACTATGT
GCAGGGACTTTTTCTCGACATGAAGGGGGATTACTGGGGCGCCATCGACATCTTCAGGAAGGTGTTGGTCCGCAAGCCTG
CCGATCCCGCTGTGCACTATTCGATCTCCCAATCATACTATCGTCTTGCCGTTCTCGATTCGGCCAGGGTCTACGGCGAA
GCGGCGGTCAGACTCGATCCATCGAACCGTTACTATCTGAGGTATCTGGCCGTTGTTGCCCATGACATGCGCGACTATGA
CCGGGCGGCGGAGTTGTACGGCCAGGCCTCTCTGTTGGAGCCTGACCGCACCGAGATCATGTATCTACAAGGGCTTGAAT
ACATGGCGGCAAAACGCCTTGAACCGGCGCTCGAAGTATTCCGGAAAGCCGTGCGGATCGATCCATACAATGAAGCCGCA
TTTGCGCAAACCCTGGCGCTGGAAATTGCTCTCAAGCACTATCCTGAAGCGATAGATACCTCGAAGCAGCTGCTCAAGCT
TGGTGGAAACGAACGCAAAATCGGCATAACGCTTGCCGAACTCTATACGAAAACCGGGCAGGAGACGCTGGCTGTTCAGA
CGCTTCAAGAGCTGATCGCGGGTGATCGCAGCAATATCACCTACTGGATCGCTTTGTTCGACCACTACATCATGGTCGGT
CGCAATGACGATTTTCATCGTGAATTGGCTGTATTCCTTGAAAGGGCCTCTTTGCCTCCTGAGTCACTGCATGATCTTGC
CAAGCTCTATATTCTGCGCTCCGGAAAGGATTCGCTCTATGTGGCGCCTACCATCGCTTTACTTGATGAGCTTACAGCCA
GAAGGCCGCGTGACAGTGAGCTGTTCATGCTGAAAGGGATGTTCGGAATGATGCACGGGCATCAGCAGGAGGGCGTCGTT
CTTTTCAGAAAAGCCGTTCAGCTCGATTCCAGCAATGCAACGGCGTGGGAGTACCTGATCTCCACTCAGCTTGATCTAGG
TCAAAAACGCCAGGCGTTCGCGCTTCTGGCCAAAGCCAGACGTCGGCTTCCCGGGCAGAGGTTTCGGTGGAGTGTCCTCG
AAGGCTCTTTGCTACTCTCTTCCCATAAGCTGCGGCGGGCGGTTGCCGTGCTTGAAACGGTTGCCGGGACGAAACGGAAG
CCTGGTGACCCGAATCTTCTGATCCAGGCCAACATCAATCTGGCGATGGCCTGCGATCTGCTTGGCATGAAAAAGCGTAG
CCGATCGGCTTATGAGCGGGTACTCGATCTCGACCCGCACAACACCCTTGCCATGAACAATCTCGCCTACCTGTTTACCG
AAGAGGGAATCACGCTTCGCAAGGCCTTACGTCTGGCCACCAATGCCGTGATGCTCGAACCGGAGAATGGTGTCTATCTC
GATACTCTCGGTTGGGTACACTACAAACTTGGCAATTTCGAGCTTGCCCGGCAGTTCCTCGAAAAGGCGGCTGCCACCGG
GCTGGATGAGCCGGATATCTACCGGCACCTTGGTGAGGTCTACCGGAAGCTCGGCAATGAACCGAAAGCAAGGGAGATGC
TGGAAAAAGCGAGAACAGTCGAGAAGACGCAGGGGAACAAAAAAAGCGGTCATTGA

Upstream 100 bases:

>100_bases
ACTGCCGAAGATGGGTAAGGCGTGTCGAATTGGCGCTTTCCGATGGCTCCTCTCGCTGCTGGCGCTCCTCGCTGGCGTGG
TGCTGTCAGCTTTCCCGGCA

Downstream 100 bases:

>100_bases
CCGCTTTTTTTGTTCGGAACCGGATCGTGGTTCAGCTTATGCTTCGCCTTCAATCGAACGGTTGGCGAGGTGTTCGTAGT
GTGCCCAGCGGGCATTGACC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide Repeat Domain Protein; TPR Repeat Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; TPR-Repeat-Containing Protein; Intermediate Filament Protein; TPR Repeat Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Domain-Containing Protein; Tpr Domain Protein

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MASVSGNSTAPDSAAVVTVQDPLSDYVQGLFLDMKGDYWGAIDIFRKVLVRKPADPAVHYSISQSYYRLAVLDSARVYGE
AAVRLDPSNRYYLRYLAVVAHDMRDYDRAAELYGQASLLEPDRTEIMYLQGLEYMAAKRLEPALEVFRKAVRIDPYNEAA
FAQTLALEIALKHYPEAIDTSKQLLKLGGNERKIGITLAELYTKTGQETLAVQTLQELIAGDRSNITYWIALFDHYIMVG
RNDDFHRELAVFLERASLPPESLHDLAKLYILRSGKDSLYVAPTIALLDELTARRPRDSELFMLKGMFGMMHGHQQEGVV
LFRKAVQLDSSNATAWEYLISTQLDLGQKRQAFALLAKARRRLPGQRFRWSVLEGSLLLSSHKLRRAVAVLETVAGTKRK
PGDPNLLIQANINLAMACDLLGMKKRSRSAYERVLDLDPHNTLAMNNLAYLFTEEGITLRKALRLATNAVMLEPENGVYL
DTLGWVHYKLGNFELARQFLEKAAATGLDEPDIYRHLGEVYRKLGNEPKAREMLEKARTVEKTQGNKKSGH

Sequences:

>Translated_551_residues
MASVSGNSTAPDSAAVVTVQDPLSDYVQGLFLDMKGDYWGAIDIFRKVLVRKPADPAVHYSISQSYYRLAVLDSARVYGE
AAVRLDPSNRYYLRYLAVVAHDMRDYDRAAELYGQASLLEPDRTEIMYLQGLEYMAAKRLEPALEVFRKAVRIDPYNEAA
FAQTLALEIALKHYPEAIDTSKQLLKLGGNERKIGITLAELYTKTGQETLAVQTLQELIAGDRSNITYWIALFDHYIMVG
RNDDFHRELAVFLERASLPPESLHDLAKLYILRSGKDSLYVAPTIALLDELTARRPRDSELFMLKGMFGMMHGHQQEGVV
LFRKAVQLDSSNATAWEYLISTQLDLGQKRQAFALLAKARRRLPGQRFRWSVLEGSLLLSSHKLRRAVAVLETVAGTKRK
PGDPNLLIQANINLAMACDLLGMKKRSRSAYERVLDLDPHNTLAMNNLAYLFTEEGITLRKALRLATNAVMLEPENGVYL
DTLGWVHYKLGNFELARQFLEKAAATGLDEPDIYRHLGEVYRKLGNEPKAREMLEKARTVEKTQGNKKSGH
>Mature_550_residues
ASVSGNSTAPDSAAVVTVQDPLSDYVQGLFLDMKGDYWGAIDIFRKVLVRKPADPAVHYSISQSYYRLAVLDSARVYGEA
AVRLDPSNRYYLRYLAVVAHDMRDYDRAAELYGQASLLEPDRTEIMYLQGLEYMAAKRLEPALEVFRKAVRIDPYNEAAF
AQTLALEIALKHYPEAIDTSKQLLKLGGNERKIGITLAELYTKTGQETLAVQTLQELIAGDRSNITYWIALFDHYIMVGR
NDDFHRELAVFLERASLPPESLHDLAKLYILRSGKDSLYVAPTIALLDELTARRPRDSELFMLKGMFGMMHGHQQEGVVL
FRKAVQLDSSNATAWEYLISTQLDLGQKRQAFALLAKARRRLPGQRFRWSVLEGSLLLSSHKLRRAVAVLETVAGTKRKP
GDPNLLIQANINLAMACDLLGMKKRSRSAYERVLDLDPHNTLAMNNLAYLFTEEGITLRKALRLATNAVMLEPENGVYLD
TLGWVHYKLGNFELARQFLEKAAATGLDEPDIYRHLGEVYRKLGNEPKAREMLEKARTVEKTQGNKKSGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62158; Mature: 62027

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVSGNSTAPDSAAVVTVQDPLSDYVQGLFLDMKGDYWGAIDIFRKVLVRKPADPAVHY
CCCCCCCCCCCCCEEEEEECCHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE
SISQSYYRLAVLDSARVYGEAAVRLDPSNRYYLRYLAVVAHDMRDYDRAAELYGQASLLE
EECCCEEEEEEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDRTEIMYLQGLEYMAAKRLEPALEVFRKAVRIDPYNEAAFAQTLALEIALKHYPEAIDT
CCCHHEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
SKQLLKLGGNERKIGITLAELYTKTGQETLAVQTLQELIAGDRSNITYWIALFDHYIMVG
HHHHHHHCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEC
RNDDFHRELAVFLERASLPPESLHDLAKLYILRSGKDSLYVAPTIALLDELTARRPRDSE
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCEEECHHHHHHHHHHHCCCCCCC
LFMLKGMFGMMHGHQQEGVVLFRKAVQLDSSNATAWEYLISTQLDLGQKRQAFALLAKAR
EEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
RRLPGQRFRWSVLEGSLLLSSHKLRRAVAVLETVAGTKRKPGDPNLLIQANINLAMACDL
HCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEHHH
LGMKKRSRSAYERVLDLDPHNTLAMNNLAYLFTEEGITLRKALRLATNAVMLEPENGVYL
HHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCHHHHHHHHHHHCEEEECCCCCEEE
DTLGWVHYKLGNFELARQFLEKAAATGLDEPDIYRHLGEVYRKLGNEPKAREMLEKARTV
EECCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EKTQGNKKSGH
HHHCCCCCCCC
>Mature Secondary Structure 
ASVSGNSTAPDSAAVVTVQDPLSDYVQGLFLDMKGDYWGAIDIFRKVLVRKPADPAVHY
CCCCCCCCCCCCEEEEEECCHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE
SISQSYYRLAVLDSARVYGEAAVRLDPSNRYYLRYLAVVAHDMRDYDRAAELYGQASLLE
EECCCEEEEEEECCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDRTEIMYLQGLEYMAAKRLEPALEVFRKAVRIDPYNEAAFAQTLALEIALKHYPEAIDT
CCCHHEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
SKQLLKLGGNERKIGITLAELYTKTGQETLAVQTLQELIAGDRSNITYWIALFDHYIMVG
HHHHHHHCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEC
RNDDFHRELAVFLERASLPPESLHDLAKLYILRSGKDSLYVAPTIALLDELTARRPRDSE
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCEEECHHHHHHHHHHHCCCCCCC
LFMLKGMFGMMHGHQQEGVVLFRKAVQLDSSNATAWEYLISTQLDLGQKRQAFALLAKAR
EEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
RRLPGQRFRWSVLEGSLLLSSHKLRRAVAVLETVAGTKRKPGDPNLLIQANINLAMACDL
HCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEHHH
LGMKKRSRSAYERVLDLDPHNTLAMNNLAYLFTEEGITLRKALRLATNAVMLEPENGVYL
HHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCHHHHHHHHHHHCEEEECCCCCEEE
DTLGWVHYKLGNFELARQFLEKAAATGLDEPDIYRHLGEVYRKLGNEPKAREMLEKARTV
EECCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EKTQGNKKSGH
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA