Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674413

Identifier: 21674413

GI number: 21674413

Start: 1503241

End: 1504119

Strand: Reverse

Name: 21674413

Synonym: CT1595

Alternate gene names: NA

Gene position: 1504119-1503241 (Counterclockwise)

Preceding gene: 21674416

Following gene: 21674409

Centisome position: 69.8

GC content: 56.77

Gene sequence:

>879_bases
GTGTCCTTTGATAAGAAAGTAACCATCGCGCATCTTTCAGATCTGCACTTTGCAAGCAAGAACGACCGTTATCTGACGGC
AAGGCTCGACACCATGCTCGGCGAGTTCGTCCGCCGCAAGTACGATCACCTCGTGATGACCGGCGATCTGATCGATACGG
CCTCACCGGCGCTCTGGACGATCATCCGGGATGCTCTCGTGCGGCATGGGCTGTTCGACTGGACGAAAACCACGGTGATT
CCCGGCAATCACGACCTGATCGACCTCGAAGAGGAGATGCGCTTCTACAACGCGCTCAATCCCGATGACCGGAGCCGCCA
GCACCGGGTTGATGACCGGCTTCGGCAGTTTAACGCGATATTCCGCCCGCTCATCACCGATAATGGCGATGCTTTGGCAG
GCGTGCCCTTCGTCAAGGTGATGCGTCTCGGTGGGATTTCGCTTTCGTTCGTGGCGGTCAATACCGTCGATCCGTGGTCG
GGGCTGGACAATCCGGCAGGTGCACGGGGCAGCGTTTCGCCTGAAACGCTCAGGGCTCTCCAGGAACCGGGTGTTCGGCA
GGTTCTCGACGACACTTTCATCATCGGTCTCTGTCACCACGCTTACAAGGTGTACGGCACCGGTGCGCTGGTCGATCAGG
TGTTCGACTGGACGATGGAGTTCAAGAACCGGGATGAATACCTCAAGGCGATGAAAAATCTTGGCGTAAGACTGGTGCTG
CATGGCCATTTTCACCGTTTTCAGGTCTATCAGGCCAACGGTATAAACTTCATTAACGGCGGCAGTTTCCGCTACTCTCC
CGAACGGTACGGAGAACTGGTCATCAACGCGGATGGCCGGTGGTCGCACCGGTTTGTCAATCTCGCGCTCAAAAAGTAG

Upstream 100 bases:

>100_bases
GAAGGGACGTTGGGATTCACAGAGAAGAACCGATCTGGCCAGATTCCTTGGTTTATCTATTAAATTTAAATCTTTCAATC
TGTAAATCAACATTGTAACG

Downstream 100 bases:

>100_bases
CCGGGCGGTTTTTGGCAAATAAAAGCGGGTGGATTTTGTTGACGAAGAAGAATGAAGAGCGATTCTTCGCGGGTTTTGTC
CACAAAGTCCGCATCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSFDKKVTIAHLSDLHFASKNDRYLTARLDTMLGEFVRRKYDHLVMTGDLIDTASPALWTIIRDALVRHGLFDWTKTTVI
PGNHDLIDLEEEMRFYNALNPDDRSRQHRVDDRLRQFNAIFRPLITDNGDALAGVPFVKVMRLGGISLSFVAVNTVDPWS
GLDNPAGARGSVSPETLRALQEPGVRQVLDDTFIIGLCHHAYKVYGTGALVDQVFDWTMEFKNRDEYLKAMKNLGVRLVL
HGHFHRFQVYQANGINFINGGSFRYSPERYGELVINADGRWSHRFVNLALKK

Sequences:

>Translated_292_residues
MSFDKKVTIAHLSDLHFASKNDRYLTARLDTMLGEFVRRKYDHLVMTGDLIDTASPALWTIIRDALVRHGLFDWTKTTVI
PGNHDLIDLEEEMRFYNALNPDDRSRQHRVDDRLRQFNAIFRPLITDNGDALAGVPFVKVMRLGGISLSFVAVNTVDPWS
GLDNPAGARGSVSPETLRALQEPGVRQVLDDTFIIGLCHHAYKVYGTGALVDQVFDWTMEFKNRDEYLKAMKNLGVRLVL
HGHFHRFQVYQANGINFINGGSFRYSPERYGELVINADGRWSHRFVNLALKK
>Mature_291_residues
SFDKKVTIAHLSDLHFASKNDRYLTARLDTMLGEFVRRKYDHLVMTGDLIDTASPALWTIIRDALVRHGLFDWTKTTVIP
GNHDLIDLEEEMRFYNALNPDDRSRQHRVDDRLRQFNAIFRPLITDNGDALAGVPFVKVMRLGGISLSFVAVNTVDPWSG
LDNPAGARGSVSPETLRALQEPGVRQVLDDTFIIGLCHHAYKVYGTGALVDQVFDWTMEFKNRDEYLKAMKNLGVRLVLH
GHFHRFQVYQANGINFINGGSFRYSPERYGELVINADGRWSHRFVNLALKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33319; Mature: 33188

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDKKVTIAHLSDLHFASKNDRYLTARLDTMLGEFVRRKYDHLVMTGDLIDTASPALWT
CCCCCEEEEEEHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCEEEECCHHHCCCHHHHH
IIRDALVRHGLFDWTKTTVIPGNHDLIDLEEEMRFYNALNPDDRSRQHRVDDRLRQFNAI
HHHHHHHHCCCCCCCCEEECCCCCCEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FRPLITDNGDALAGVPFVKVMRLGGISLSFVAVNTVDPWSGLDNPAGARGSVSPETLRAL
HHHHHCCCCCCEECCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
QEPGVRQVLDDTFIIGLCHHAYKVYGTGALVDQVFDWTMEFKNRDEYLKAMKNLGVRLVL
HCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEE
HGHFHRFQVYQANGINFINGGSFRYSPERYGELVINADGRWSHRFVNLALKK
ECCCEEEEEEECCCCEEECCCCEEECHHHHCEEEECCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SFDKKVTIAHLSDLHFASKNDRYLTARLDTMLGEFVRRKYDHLVMTGDLIDTASPALWT
CCCCEEEEEEHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCEEEECCHHHCCCHHHHH
IIRDALVRHGLFDWTKTTVIPGNHDLIDLEEEMRFYNALNPDDRSRQHRVDDRLRQFNAI
HHHHHHHHCCCCCCCCEEECCCCCCEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FRPLITDNGDALAGVPFVKVMRLGGISLSFVAVNTVDPWSGLDNPAGARGSVSPETLRAL
HHHHHCCCCCCEECCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
QEPGVRQVLDDTFIIGLCHHAYKVYGTGALVDQVFDWTMEFKNRDEYLKAMKNLGVRLVL
HCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEE
HGHFHRFQVYQANGINFINGGSFRYSPERYGELVINADGRWSHRFVNLALKK
ECCCEEEEEEECCCCEEECCCCEEECHHHHCEEEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA