Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674416

Identifier: 21674416

GI number: 21674416

Start: 1507413

End: 1508228

Strand: Reverse

Name: 21674416

Synonym: CT1598

Alternate gene names: NA

Gene position: 1508228-1507413 (Counterclockwise)

Preceding gene: 21674417

Following gene: 21674413

Centisome position: 69.99

GC content: 54.53

Gene sequence:

>816_bases
GTGACGCAGTTCTATCAGGCTTCACCCCGGTTGGTGCTTGCCGTTCTCATTGCCATCGTGATTGCCCGCCCGCTTGAACT
CAAAATATTCGACAAGGAGATACGCGAGAAGCTCAAGGAGCGTTACCTCGCCGATCAGCAGGCGCAGATTACGCGGTTGC
AGGAGTCGTTCAAGACAAACTATGCCCTTGAACTTTCCATGATCTCAAGGCACCAGAGTGAGTATGACGAGCTCGACAGG
GATACGGCCCGTTTACGTGAAGAGCTCAAGGCCGAAGTGTTTGGCGACAAGACCTCTACGACTTCAGGCATTGTCGGATA
TGGCAGTTATGCGAAAAACAAGGAGGCTGTTATACAGTCCAAACAGGCCCGGCTGGACTATCTGGCCAGAAAACTGGCAT
CGCTCGAAGAGTTCGTGAATCGTCAAAAAGAGGTTGAGGGCATAAACAGCAATCTCATGCTTTCGGACGCCATGCTCGAT
CAGAAGGCATCAAAAGCCGGTTTTGCAGATCGAAACTGGGCACTTGGCGCGCTGACCCACGCAACTGACGACGTCAGCCG
TTCATCGGCCCACGCGGTGACGTTCATCACGCTGCTGATTATCGCTTTTGAATGCGCCCCTCTGATTGTGAAACTGCTGT
CCGATGCAGGCCCATCCGACGTCGATATTCGTGAAAGCGAGGCAAGGATCATCGCCCGTCTCGCCAATCCCGCGCTCATT
GACAGCCCTCGTTCGGTGCGCCATTACAACACGCCATCATTTCGCTCCATGCCAGGCCGCAGGAACAGATTCTCCGGCTA
CCGGCGTCGCAGGTAG

Upstream 100 bases:

>100_bases
CGACTGGTTTGCATCGATACTGTTCGGGATATTCTGAGGACTGGCCATTTTCAATCTTGATCGTTACATCGTTTCAAGCA
TAAAGAAAACCTCGAAAGGA

Downstream 100 bases:

>100_bases
GTCTCCCCACTGCTTCACGTGTTCCTAAACCATCAGGCTGCCGACATACTCCTGAAATGCCGGAGCGTCAGGTTGCGAGA
AGAATTTGTCGATCGCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTQFYQASPRLVLAVLIAIVIARPLELKIFDKEIREKLKERYLADQQAQITRLQESFKTNYALELSMISRHQSEYDELDR
DTARLREELKAEVFGDKTSTTSGIVGYGSYAKNKEAVIQSKQARLDYLARKLASLEEFVNRQKEVEGINSNLMLSDAMLD
QKASKAGFADRNWALGALTHATDDVSRSSAHAVTFITLLIIAFECAPLIVKLLSDAGPSDVDIRESEARIIARLANPALI
DSPRSVRHYNTPSFRSMPGRRNRFSGYRRRR

Sequences:

>Translated_271_residues
MTQFYQASPRLVLAVLIAIVIARPLELKIFDKEIREKLKERYLADQQAQITRLQESFKTNYALELSMISRHQSEYDELDR
DTARLREELKAEVFGDKTSTTSGIVGYGSYAKNKEAVIQSKQARLDYLARKLASLEEFVNRQKEVEGINSNLMLSDAMLD
QKASKAGFADRNWALGALTHATDDVSRSSAHAVTFITLLIIAFECAPLIVKLLSDAGPSDVDIRESEARIIARLANPALI
DSPRSVRHYNTPSFRSMPGRRNRFSGYRRRR
>Mature_270_residues
TQFYQASPRLVLAVLIAIVIARPLELKIFDKEIREKLKERYLADQQAQITRLQESFKTNYALELSMISRHQSEYDELDRD
TARLREELKAEVFGDKTSTTSGIVGYGSYAKNKEAVIQSKQARLDYLARKLASLEEFVNRQKEVEGINSNLMLSDAMLDQ
KASKAGFADRNWALGALTHATDDVSRSSAHAVTFITLLIIAFECAPLIVKLLSDAGPSDVDIRESEARIIARLANPALID
SPRSVRHYNTPSFRSMPGRRNRFSGYRRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30713; Mature: 30582

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFYQASPRLVLAVLIAIVIARPLELKIFDKEIREKLKERYLADQQAQITRLQESFKTN
CCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
YALELSMISRHQSEYDELDRDTARLREELKAEVFGDKTSTTSGIVGYGSYAKNKEAVIQS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHH
KQARLDYLARKLASLEEFVNRQKEVEGINSNLMLSDAMLDQKASKAGFADRNWALGALTH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHH
ATDDVSRSSAHAVTFITLLIIAFECAPLIVKLLSDAGPSDVDIRESEARIIARLANPALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHC
DSPRSVRHYNTPSFRSMPGRRNRFSGYRRRR
CCCCHHCCCCCCCHHCCCCCCHHHCCHHCCC
>Mature Secondary Structure 
TQFYQASPRLVLAVLIAIVIARPLELKIFDKEIREKLKERYLADQQAQITRLQESFKTN
CCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
YALELSMISRHQSEYDELDRDTARLREELKAEVFGDKTSTTSGIVGYGSYAKNKEAVIQS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHH
KQARLDYLARKLASLEEFVNRQKEVEGINSNLMLSDAMLDQKASKAGFADRNWALGALTH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHH
ATDDVSRSSAHAVTFITLLIIAFECAPLIVKLLSDAGPSDVDIRESEARIIARLANPALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHC
DSPRSVRHYNTPSFRSMPGRRNRFSGYRRRR
CCCCHHCCCCCCCHHCCCCCCHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA