| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674407
Identifier: 21674407
GI number: 21674407
Start: 1496180
End: 1497208
Strand: Reverse
Name: 21674407
Synonym: CT1589
Alternate gene names: NA
Gene position: 1497208-1496180 (Counterclockwise)
Preceding gene: 21674408
Following gene: 21674404
Centisome position: 69.48
GC content: 40.62
Gene sequence:
>1029_bases ATGTCCAATACGAAGAAGGGGCTTGCTACAGCTGGTTATAATGATGACCTCGCGAAGTTAGAAGAGATATTTTTGCCGAA TTTTTTTTATAAAAAGATGCAATATTATTTCTCTAGCTCCGGCTTAATAAGTAATGATGTCTTGTTTGTTCACTATACAT CGACAGAGTCGGCATTGGATATTATTAGAGAGAAACGGGTTCTGATGCGTAATGCTCTTCATATGCCAGACAGACAAGAG GTGCAGGATGGGTTTAATATCATGGATGGTCTTTTGTCAAATGAAAATAACCATTGGGTTGAATTTAGAAATCGTATTGA GGTGGTTTTGCCGGGAGTTGTTGACAGGGTAATGAAGATTTATAGTGATCATTCTCATGGCAGGAATGATGGAACGTATT TTCTGTCAGTGTTGGAGCATGATGAAAGTGAGAAAGAGTTGGGTCGATTGTCTATGTGGAGGGCGTTTTGTGGTCAGTCG CAGCCTGTAGCTATGTTTCTTAGACTTCCGGCTCTGTCAGCTGTTTCACAAGTTTTGCGGATATTTTTCAATCCGGTTTT ATATAAAGGAAAAGGTCAACAGCATCTGGAACTTGCCGAGGTTATTAAAAATGTTGAAAATCATAAATCCTTCCTTGAAC GCCTGGACCCGGATCTTGTTACCTCTGCAATAGTCTCGATGATTCTGATTAACGTTCTCTGTGTGAAGCATAAAGTATTC AAGGAGGAGCGTGAGTGGCGTTGTGTTTATTTGCCAAAATGCTTTACATCGGAGACTTCTGCGCGATTGATAGAGCCGGG TGTTGAAGAGCAGGTTGGTGCTTCGCGTAATGTGTACAAGATGCCTCTGAATGCTGCTATCGATCCTGTTCTTTCTGATA TTGACCTTTCTAAAATATTCGACAGTCTGATTATCGGTCCATCAAAATCTCCTTATGCTACGTATGAAGTTTTTTGTGAT GAACTGAAAAAAATCGGCGTTTCAGATGTGGAGTCAAAAGTGAGAGTTACCGAAATTCCGGTCAGATGA
Upstream 100 bases:
>100_bases AAAGGCCGGTCATCTCTGTGGACGCCGGCCTTTTTTGTCTTTTTTATAATAAATTTACTATCACCATTGGTTAAGTCCTT GCCAAGAAAAAAAGGGTGCC
Downstream 100 bases:
>100_bases TTGATCTATTCCCGCTTTACGGACGGACTTTTGTATAGCCATATTTCTCCTGTTCATAGATCGCCTTTTATTGCTGGATA AAAGGCAATTGTTATAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSNTKKGLATAGYNDDLAKLEEIFLPNFFYKKMQYYFSSSGLISNDVLFVHYTSTESALDIIREKRVLMRNALHMPDRQE VQDGFNIMDGLLSNENNHWVEFRNRIEVVLPGVVDRVMKIYSDHSHGRNDGTYFLSVLEHDESEKELGRLSMWRAFCGQS QPVAMFLRLPALSAVSQVLRIFFNPVLYKGKGQQHLELAEVIKNVENHKSFLERLDPDLVTSAIVSMILINVLCVKHKVF KEEREWRCVYLPKCFTSETSARLIEPGVEEQVGASRNVYKMPLNAAIDPVLSDIDLSKIFDSLIIGPSKSPYATYEVFCD ELKKIGVSDVESKVRVTEIPVR
Sequences:
>Translated_342_residues MSNTKKGLATAGYNDDLAKLEEIFLPNFFYKKMQYYFSSSGLISNDVLFVHYTSTESALDIIREKRVLMRNALHMPDRQE VQDGFNIMDGLLSNENNHWVEFRNRIEVVLPGVVDRVMKIYSDHSHGRNDGTYFLSVLEHDESEKELGRLSMWRAFCGQS QPVAMFLRLPALSAVSQVLRIFFNPVLYKGKGQQHLELAEVIKNVENHKSFLERLDPDLVTSAIVSMILINVLCVKHKVF KEEREWRCVYLPKCFTSETSARLIEPGVEEQVGASRNVYKMPLNAAIDPVLSDIDLSKIFDSLIIGPSKSPYATYEVFCD ELKKIGVSDVESKVRVTEIPVR >Mature_341_residues SNTKKGLATAGYNDDLAKLEEIFLPNFFYKKMQYYFSSSGLISNDVLFVHYTSTESALDIIREKRVLMRNALHMPDRQEV QDGFNIMDGLLSNENNHWVEFRNRIEVVLPGVVDRVMKIYSDHSHGRNDGTYFLSVLEHDESEKELGRLSMWRAFCGQSQ PVAMFLRLPALSAVSQVLRIFFNPVLYKGKGQQHLELAEVIKNVENHKSFLERLDPDLVTSAIVSMILINVLCVKHKVFK EEREWRCVYLPKCFTSETSARLIEPGVEEQVGASRNVYKMPLNAAIDPVLSDIDLSKIFDSLIIGPSKSPYATYEVFCDE LKKIGVSDVESKVRVTEIPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39093; Mature: 38962
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTKKGLATAGYNDDLAKLEEIFLPNFFYKKMQYYFSSSGLISNDVLFVHYTSTESALD CCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCEEEEEECCCHHHHH IIREKRVLMRNALHMPDRQEVQDGFNIMDGLLSNENNHWVEFRNRIEVVLPGVVDRVMKI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHEEECHHHHHHHHH YSDHSHGRNDGTYFLSVLEHDESEKELGRLSMWRAFCGQSQPVAMFLRLPALSAVSQVLR HHCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IFFNPVLYKGKGQQHLELAEVIKNVENHKSFLERLDPDLVTSAIVSMILINVLCVKHKVF HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KEEREWRCVYLPKCFTSETSARLIEPGVEEQVGASRNVYKMPLNAAIDPVLSDIDLSKIF HHCCCCEEEECCCHHCCCCHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHHHHCCHHHHH DSLIIGPSKSPYATYEVFCDELKKIGVSDVESKVRVTEIPVR HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCEEEEECCCC >Mature Secondary Structure SNTKKGLATAGYNDDLAKLEEIFLPNFFYKKMQYYFSSSGLISNDVLFVHYTSTESALD CCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCEEEEEECCCHHHHH IIREKRVLMRNALHMPDRQEVQDGFNIMDGLLSNENNHWVEFRNRIEVVLPGVVDRVMKI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHEEECHHHHHHHHH YSDHSHGRNDGTYFLSVLEHDESEKELGRLSMWRAFCGQSQPVAMFLRLPALSAVSQVLR HHCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IFFNPVLYKGKGQQHLELAEVIKNVENHKSFLERLDPDLVTSAIVSMILINVLCVKHKVF HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KEEREWRCVYLPKCFTSETSARLIEPGVEEQVGASRNVYKMPLNAAIDPVLSDIDLSKIF HHCCCCEEEECCCHHCCCCHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHHHHCCHHHHH DSLIIGPSKSPYATYEVFCDELKKIGVSDVESKVRVTEIPVR HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA