| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is lnt
Identifier: 21674318
GI number: 21674318
Start: 1402230
End: 1403831
Strand: Reverse
Name: lnt
Synonym: CT1498
Alternate gene names: 21674318
Gene position: 1403831-1402230 (Counterclockwise)
Preceding gene: 21674320
Following gene: 21674315
Centisome position: 65.14
GC content: 54.87
Gene sequence:
>1602_bases ATGAATGGCGCTTATAGAGGCGCCTTGTCTCGTTTACTTTCGAAACCTTTTTTTCTGCCGCTCCTGAGCGGCCTGCTCCT CGGGATATCCTTTCCGACCTGGCCTGCCGTCCATCTCGAACCTCTTGCATGGATAGCTCTGGTGCCGTTATTGCTTTCAC TTGAACACGAAGAACGTTTTGGCCCTTTTTTCAGAAAGAGCTGGATGTCGATGCTTTTGTTCTGTCTTATCGCGCTCTGG TGGGTATGCCTCGCAACCTTTGTTGGCGGCATTCTCACCGTGTTTGTGCAGTCTCTTTTTTCAGTCGTGCCGTTGGTGGT GTTCTACTATTTCAAGAAAAGAGCCGGTTTTCGATCAGCCCTGCTTGCCTTGCCTTTTATATGGACGGGGTGGGAGTGGG CTTACATGCAGCAGGATTTTTCGCTCGGGTGGTTGACCTTCGGCAATTCGCAGGCCAATCTGCTCTGGATGGTACAGTAT GCTGATGTGACGGGCGTGTGGGGCGTTAGTTTCTGGCTGTTGACTTTCAATGTGCTTGTGCTGTTGCTTTTCATGGAAAA GGAGTCGTTTCAGGTGAAGGTGGGTATCGTAATGGTCATGCTTGTGATGATTGCTACTCCGCTTCTTTACGCGCGTCAGG TTTTCCGGAATACGGCGTTGGATAATACTTCCCCTAAAGTACGTGTTGCGTTGGTGCAGCCTGATATCGATCCTCACGAA AAATGGGATGGCCTCGGCCCGGAAGAGACCCTGTCACGGCTATACAGCCTGACCGGGCAATCGGTGCGCGGGGAGCGTCT GGAGCTGATCATCTGGCCGGAAACCGCCATACCGTTTTATATCCGCTTGCCGGAAAACAAGCCCTACATGGACTCGGTCA GGCGCATGGTCATGCGCTGGAATACCCCCTTGCTGACCGGATTTCCCGATGAGGTGCCGGTTTTTCCGAACTCTGCGAGG GGCGAGGCTGTGGCTGCTTCCGGGGCGGAGTATGCCGCTTACAATGCCTCCATGCTTCTGCATCCGGCAGGCGGGCCGGT GCAGATTTACCGGAAGATGCGCCTGGTGCCTTTCGGAGAGCGGGTTCCCTATTCGGAATATTTCCCCTGGCTGGAGAGGC TCAGCTTTTCGATGTCAGGAATATCGAGCTGGGCGAAAGGGCGGGAAGCTACGGTCATGCACTTCACGAGCCGTGACGGT CAGCCGGTCAGGATGGCCAACATTATCTGCTATGAATCGATTTTTCCCGGTCAGGTATCGACGTTTGTCAGGCGAGGTGC GCAGTTCTTGACGCTTGTTACCAACGATGGCTGGTATGGTACATCGTATGGCCCGTGGCAACATGCGGCTATCGACAGGC TCCGCTGCATCGAAAACCGCCGTGCTATGGCCCGCTGCGCCAATACTGGCGTGACCCTTTTCTACGATATCTGTGGGCGC AGTTATGCTGAAACGCCCTGGTGGCAACAGTCGGTGCTGACTGCCGATGTGCCGCTTGAAAGCAGGATCACTTTTTACAC GGCCCATCCGGATTTGGTGCCCCACGTATGTCTGGGGATTGCAGGTGTGCTGGCGCTGGTGGCGGCGGTGAGAAAGCGGT AG
Upstream 100 bases:
>100_bases GCTTCCGGCGACCTTCTTTCCGTTTCCTTTCAATAGTGTCTGCATTGACTCAGGCGAGCTGTTTCTGCCCATTATCATGT CTTGTAAAGGGGTGTCAGTC
Downstream 100 bases:
>100_bases TAGGCGAAAAACGAAAACGTGTTGTGAGCAACAATATGTAATTCTTCCTACAGTCCGTACTCCTTGATTTTGCGGTAGAG CGTCCGCTCATTGATGCCGA
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MNGAYRGALSRLLSKPFFLPLLSGLLLGISFPTWPAVHLEPLAWIALVPLLLSLEHEERFGPFFRKSWMSMLLFCLIALW WVCLATFVGGILTVFVQSLFSVVPLVVFYYFKKRAGFRSALLALPFIWTGWEWAYMQQDFSLGWLTFGNSQANLLWMVQY ADVTGVWGVSFWLLTFNVLVLLLFMEKESFQVKVGIVMVMLVMIATPLLYARQVFRNTALDNTSPKVRVALVQPDIDPHE KWDGLGPEETLSRLYSLTGQSVRGERLELIIWPETAIPFYIRLPENKPYMDSVRRMVMRWNTPLLTGFPDEVPVFPNSAR GEAVAASGAEYAAYNASMLLHPAGGPVQIYRKMRLVPFGERVPYSEYFPWLERLSFSMSGISSWAKGREATVMHFTSRDG QPVRMANIICYESIFPGQVSTFVRRGAQFLTLVTNDGWYGTSYGPWQHAAIDRLRCIENRRAMARCANTGVTLFYDICGR SYAETPWWQQSVLTADVPLESRITFYTAHPDLVPHVCLGIAGVLALVAAVRKR
Sequences:
>Translated_533_residues MNGAYRGALSRLLSKPFFLPLLSGLLLGISFPTWPAVHLEPLAWIALVPLLLSLEHEERFGPFFRKSWMSMLLFCLIALW WVCLATFVGGILTVFVQSLFSVVPLVVFYYFKKRAGFRSALLALPFIWTGWEWAYMQQDFSLGWLTFGNSQANLLWMVQY ADVTGVWGVSFWLLTFNVLVLLLFMEKESFQVKVGIVMVMLVMIATPLLYARQVFRNTALDNTSPKVRVALVQPDIDPHE KWDGLGPEETLSRLYSLTGQSVRGERLELIIWPETAIPFYIRLPENKPYMDSVRRMVMRWNTPLLTGFPDEVPVFPNSAR GEAVAASGAEYAAYNASMLLHPAGGPVQIYRKMRLVPFGERVPYSEYFPWLERLSFSMSGISSWAKGREATVMHFTSRDG QPVRMANIICYESIFPGQVSTFVRRGAQFLTLVTNDGWYGTSYGPWQHAAIDRLRCIENRRAMARCANTGVTLFYDICGR SYAETPWWQQSVLTADVPLESRITFYTAHPDLVPHVCLGIAGVLALVAAVRKR >Mature_533_residues MNGAYRGALSRLLSKPFFLPLLSGLLLGISFPTWPAVHLEPLAWIALVPLLLSLEHEERFGPFFRKSWMSMLLFCLIALW WVCLATFVGGILTVFVQSLFSVVPLVVFYYFKKRAGFRSALLALPFIWTGWEWAYMQQDFSLGWLTFGNSQANLLWMVQY ADVTGVWGVSFWLLTFNVLVLLLFMEKESFQVKVGIVMVMLVMIATPLLYARQVFRNTALDNTSPKVRVALVQPDIDPHE KWDGLGPEETLSRLYSLTGQSVRGERLELIIWPETAIPFYIRLPENKPYMDSVRRMVMRWNTPLLTGFPDEVPVFPNSAR GEAVAASGAEYAAYNASMLLHPAGGPVQIYRKMRLVPFGERVPYSEYFPWLERLSFSMSGISSWAKGREATVMHFTSRDG QPVRMANIICYESIFPGQVSTFVRRGAQFLTLVTNDGWYGTSYGPWQHAAIDRLRCIENRRAMARCANTGVTLFYDICGR SYAETPWWQQSVLTADVPLESRITFYTAHPDLVPHVCLGIAGVLALVAAVRKR
Specific function: Transfers the fatty acyl group on membrane lipoproteins
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain
Homologues:
Organism=Escherichia coli, GI1786878, Length=397, Percent_Identity=27.9596977329975, Blast_Score=112, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LNT_CHLTE (Q8KCC4)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662383.1 - ProteinModelPortal: Q8KCC4 - GeneID: 1006039 - GenomeReviews: AE006470_GR - KEGG: cte:CT1498 - NMPDR: fig|194439.1.peg.1477 - TIGR: CT1498 - HOGENOM: HBG405346 - OMA: IITNDGW - ProtClustDB: CLSK637794 - BioCyc: CTEP194439:CT_1498-MONOMER - HAMAP: MF_01148 - InterPro: IPR004563 - InterPro: IPR003010 - Gene3D: G3DSA:3.60.110.10 - TIGRFAMs: TIGR00546
Pfam domain/function: PF00795 CN_hydrolase; SSF56317 Ntlse/CNhydtse
EC number: 2.3.1.- [C]
Molecular weight: Translated: 60528; Mature: 60528
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe34f6d8)-; HASH(0xe8972f4)-; HASH(0xd6fcf90)-; HASH(0xd8be874)-; HASH(0xebdb4f8)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAYRGALSRLLSKPFFLPLLSGLLLGISFPTWPAVHLEPLAWIALVPLLLSLEHEERF CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHC GPFFRKSWMSMLLFCLIALWWVCLATFVGGILTVFVQSLFSVVPLVVFYYFKKRAGFRSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LLALPFIWTGWEWAYMQQDFSLGWLTFGNSQANLLWMVQYADVTGVWGVSFWLLTFNVLV HHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH LLLFMEKESFQVKVGIVMVMLVMIATPLLYARQVFRNTALDNTSPKVRVALVQPDIDPHE HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHH KWDGLGPEETLSRLYSLTGQSVRGERLELIIWPETAIPFYIRLPENKPYMDSVRRMVMRW HCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHC NTPLLTGFPDEVPVFPNSARGEAVAASGAEYAAYNASMLLHPAGGPVQIYRKMRLVPFGE CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCEEEEECCCCHHHHHHHHHCCCCCC RVPYSEYFPWLERLSFSMSGISSWAKGREATVMHFTSRDGQPVRMANIICYESIFPGQVS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHEEEHHCCCCHHHH TFVRRGAQFLTLVTNDGWYGTSYGPWQHAAIDRLRCIENRRAMARCANTGVTLFYDICGR HHHHCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCC SYAETPWWQQSVLTADVPLESRITFYTAHPDLVPHVCLGIAGVLALVAAVRKR CCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MNGAYRGALSRLLSKPFFLPLLSGLLLGISFPTWPAVHLEPLAWIALVPLLLSLEHEERF CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHC GPFFRKSWMSMLLFCLIALWWVCLATFVGGILTVFVQSLFSVVPLVVFYYFKKRAGFRSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LLALPFIWTGWEWAYMQQDFSLGWLTFGNSQANLLWMVQYADVTGVWGVSFWLLTFNVLV HHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH LLLFMEKESFQVKVGIVMVMLVMIATPLLYARQVFRNTALDNTSPKVRVALVQPDIDPHE HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHH KWDGLGPEETLSRLYSLTGQSVRGERLELIIWPETAIPFYIRLPENKPYMDSVRRMVMRW HCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHC NTPLLTGFPDEVPVFPNSARGEAVAASGAEYAAYNASMLLHPAGGPVQIYRKMRLVPFGE CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCEEEEECCCCHHHHHHHHHCCCCCC RVPYSEYFPWLERLSFSMSGISSWAKGREATVMHFTSRDGQPVRMANIICYESIFPGQVS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHEEEHHCCCCHHHH TFVRRGAQFLTLVTNDGWYGTSYGPWQHAAIDRLRCIENRRAMARCANTGVTLFYDICGR HHHHCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCC SYAETPWWQQSVLTADVPLESRITFYTAHPDLVPHVCLGIAGVLALVAAVRKR CCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12093901