| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674320
Identifier: 21674320
GI number: 21674320
Start: 1405334
End: 1405738
Strand: Reverse
Name: 21674320
Synonym: CT1500
Alternate gene names: NA
Gene position: 1405738-1405334 (Counterclockwise)
Preceding gene: 21674322
Following gene: 21674318
Centisome position: 65.23
GC content: 52.1
Gene sequence:
>405_bases ATGGCCTTTGAATCAAGCAAAAGTTACTATTCGATAGGTGAGGTGAGCCGGATTTCCGGCATTCCCGCTTACCTGCTCCG CTACTGGGAGGACTATTTCAGCGAGCTCGCTCCGGCAAGAGACACTCGCGGGAACCGGCGCTACACCAACCGGGATATTG CCATGGTGCTCAATATCAAGGATCTGGTGTACGAAAAAGGGTACAAGCTGAACAAGGCGAGCCAGATGGTCAAGGGCGGC AAGGTTGATCATGATGGTGCCGATCACAAAACCAACGAGATACTGAAGCTGCAAAAGCAGCTTTTGAGGGAGCAGAAGGA GTACGAGATCACCGGAGAGCGCCGCAGAATGCTGCTGCTTGAAATCAAGGACGAGATTGAGGATATTCTGGAGCTTCTGG GATGA
Upstream 100 bases:
>100_bases GAGATATGGGCGCAGGGCCAGCAGATTTTTCATCCGTTCTTTTTTGATGTGACGCACTTAATGTATAATAAGTGAAGCGA AATCAAAACGGACTTCGACG
Downstream 100 bases:
>100_bases CCGAAAAAAGAGGCGGATATGAGCTTCTTTTGCTCATATTGATTCTGCGGTAAATGTCTTAACTGAAATCGTTATCAAAA TCGGGGTCTGACTCGGTTTT
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIKDLVYEKGYKLNKASQMVKGG KVDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLLEIKDEIEDILELLG
Sequences:
>Translated_134_residues MAFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIKDLVYEKGYKLNKASQMVKGG KVDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLLEIKDEIEDILELLG >Mature_133_residues AFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIKDLVYEKGYKLNKASQMVKGGK VDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLLEIKDEIEDILELLG
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15693; Mature: 15562
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIK CCCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHH DLVYEKGYKLNKASQMVKGGKVDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLL HHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EIKDEIEDILELLG HHHHHHHHHHHHHC >Mature Secondary Structure AFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIK CCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHH DLVYEKGYKLNKASQMVKGGKVDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLL HHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EIKDEIEDILELLG HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA