Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674320

Identifier: 21674320

GI number: 21674320

Start: 1405334

End: 1405738

Strand: Reverse

Name: 21674320

Synonym: CT1500

Alternate gene names: NA

Gene position: 1405738-1405334 (Counterclockwise)

Preceding gene: 21674322

Following gene: 21674318

Centisome position: 65.23

GC content: 52.1

Gene sequence:

>405_bases
ATGGCCTTTGAATCAAGCAAAAGTTACTATTCGATAGGTGAGGTGAGCCGGATTTCCGGCATTCCCGCTTACCTGCTCCG
CTACTGGGAGGACTATTTCAGCGAGCTCGCTCCGGCAAGAGACACTCGCGGGAACCGGCGCTACACCAACCGGGATATTG
CCATGGTGCTCAATATCAAGGATCTGGTGTACGAAAAAGGGTACAAGCTGAACAAGGCGAGCCAGATGGTCAAGGGCGGC
AAGGTTGATCATGATGGTGCCGATCACAAAACCAACGAGATACTGAAGCTGCAAAAGCAGCTTTTGAGGGAGCAGAAGGA
GTACGAGATCACCGGAGAGCGCCGCAGAATGCTGCTGCTTGAAATCAAGGACGAGATTGAGGATATTCTGGAGCTTCTGG
GATGA

Upstream 100 bases:

>100_bases
GAGATATGGGCGCAGGGCCAGCAGATTTTTCATCCGTTCTTTTTTGATGTGACGCACTTAATGTATAATAAGTGAAGCGA
AATCAAAACGGACTTCGACG

Downstream 100 bases:

>100_bases
CCGAAAAAAGAGGCGGATATGAGCTTCTTTTGCTCATATTGATTCTGCGGTAAATGTCTTAACTGAAATCGTTATCAAAA
TCGGGGTCTGACTCGGTTTT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIKDLVYEKGYKLNKASQMVKGG
KVDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLLEIKDEIEDILELLG

Sequences:

>Translated_134_residues
MAFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIKDLVYEKGYKLNKASQMVKGG
KVDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLLEIKDEIEDILELLG
>Mature_133_residues
AFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIKDLVYEKGYKLNKASQMVKGGK
VDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLLEIKDEIEDILELLG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15693; Mature: 15562

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIK
CCCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHH
DLVYEKGYKLNKASQMVKGGKVDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLL
HHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EIKDEIEDILELLG
HHHHHHHHHHHHHC
>Mature Secondary Structure 
AFESSKSYYSIGEVSRISGIPAYLLRYWEDYFSELAPARDTRGNRRYTNRDIAMVLNIK
CCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHH
DLVYEKGYKLNKASQMVKGGKVDHDGADHKTNEILKLQKQLLREQKEYEITGERRRMLLL
HHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EIKDEIEDILELLG
HHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA