| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674250
Identifier: 21674250
GI number: 21674250
Start: 1341551
End: 1342060
Strand: Reverse
Name: 21674250
Synonym: CT1429
Alternate gene names: NA
Gene position: 1342060-1341551 (Counterclockwise)
Preceding gene: 21674251
Following gene: 21674245
Centisome position: 62.28
GC content: 55.1
Gene sequence:
>510_bases ATGAACCTGCTGATTCTGCTGCTGGCGGTCATCATTCTGCTGCTTCTCGTCATCATCACGATGCTTGCGACCGGATGGCC CGGCAAGCAACGCGAGGAGGTCGAGCGGCTCGGCAACAGCCTGCGCCGCGAAATTCTGGAACAGCGGAGCGGCAATCTCC AGCTCATGAAGTCTCTCCGCATCGTGATCGAGGATGCCGTCCGCGAATCGGTCGAAAAGGAGATGATGGCTGTCGCGCCG AGAGGTCGTTCGCGGAGAAATTCCCGCAAGAAAATACAGGAAGCGGTTGATCTCGGTTCCGAATTGTTCATTGCCGGTGA TGAAGATGCTGATAACGGCAGTTATGAATCTCCTTTGCAAGCCATGCAGCTTTCCCTTTTTTCAGAGATGACAGAGCGCG TGCAGGCGGCTGCGGTGCCAGATGCTTCGCCTGATAAAACCAAAGAGCGGGAACCTGAAGGCGAGACTATCCACATGGGT TATGTCGATGACATTCCGGATGTGGAGTAG
Upstream 100 bases:
>100_bases GAGGCCGTCGGTCGATCATCGATGGCGAGGGTCTCGTCAGCGCGAACCGCTCGATGGGCGAAGCGCTCATCGAGGCGATC GGCAAAGGGGAGCGCGCCCG
Downstream 100 bases:
>100_bases GTGCTGTTTCTTTTAGAGAAGCAATCAGCTGAGGGCAGCGGCGATGGCTTTGGCGAAGTTGGGGCCGTCGAAGTATTCGG GGATGATGTCCACCTTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNLLILLLAVIILLLLVIITMLATGWPGKQREEVERLGNSLRREILEQRSGNLQLMKSLRIVIEDAVRESVEKEMMAVAP RGRSRRNSRKKIQEAVDLGSELFIAGDEDADNGSYESPLQAMQLSLFSEMTERVQAAAVPDASPDKTKEREPEGETIHMG YVDDIPDVE
Sequences:
>Translated_169_residues MNLLILLLAVIILLLLVIITMLATGWPGKQREEVERLGNSLRREILEQRSGNLQLMKSLRIVIEDAVRESVEKEMMAVAP RGRSRRNSRKKIQEAVDLGSELFIAGDEDADNGSYESPLQAMQLSLFSEMTERVQAAAVPDASPDKTKEREPEGETIHMG YVDDIPDVE >Mature_169_residues MNLLILLLAVIILLLLVIITMLATGWPGKQREEVERLGNSLRREILEQRSGNLQLMKSLRIVIEDAVRESVEKEMMAVAP RGRSRRNSRKKIQEAVDLGSELFIAGDEDADNGSYESPLQAMQLSLFSEMTERVQAAAVPDASPDKTKEREPEGETIHMG YVDDIPDVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18945; Mature: 18945
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLILLLAVIILLLLVIITMLATGWPGKQREEVERLGNSLRREILEQRSGNLQLMKSLR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IVIEDAVRESVEKEMMAVAPRGRSRRNSRKKIQEAVDLGSELFIAGDEDADNGSYESPLQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHH AMQLSLFSEMTERVQAAAVPDASPDKTKEREPEGETIHMGYVDDIPDVE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MNLLILLLAVIILLLLVIITMLATGWPGKQREEVERLGNSLRREILEQRSGNLQLMKSLR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IVIEDAVRESVEKEMMAVAPRGRSRRNSRKKIQEAVDLGSELFIAGDEDADNGSYESPLQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHH AMQLSLFSEMTERVQAAAVPDASPDKTKEREPEGETIHMGYVDDIPDVE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA