Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674178

Identifier: 21674178

GI number: 21674178

Start: 1273916

End: 1274839

Strand: Direct

Name: 21674178

Synonym: CT1356

Alternate gene names: NA

Gene position: 1273916-1274839 (Clockwise)

Preceding gene: 21674176

Following gene: 21674179

Centisome position: 59.12

GC content: 45.02

Gene sequence:

>924_bases
ATGACACAGCAAACAAACCATCACTCGGGAACAGCGAATGGCTCCCGCTGTGTTGTTCTCGACACAGCATCTTATTGTCT
GCTCCTCAAAGGTGACAGCCCTCCTTTTTCTGCCGAAGAGCGGTCGTTGCTCATAGCCGAATCGCCCGAAGAAGCATGCG
ATTTCCAGTGTCTTCTTGGTGACGCTTGCCAACCATTCCTTTCCCAGGAATATCGCCGTATTCATCCGGGTCTCTACGAA
AAACTCGAGGCCATTGCTATATCAGGTTGGAACAATGATGCGCCATTCGGTATTGACACGGCTGCGCACCTCATGAAAAA
ACTGCCGCTTGACCTGAACTGTCTTATCAACAGTCCAATTGCCCTCAGCCCGAATGACCCGCTACCAGCTCTTATTCAGA
AAAATCTGGTTCACAAACATGTCGAAGCGAATGTTCTTGTTTCAGAACCTTTTACAGCTGGCAGGCTGCGTTACTTCAAT
ATATTTTCAGAAACAGCGGAGCTGAAATTCGATCATCAGTCACCTCATGTTCAAGGACTACTTATTCTCGAGGCATTGAG
ACAGGCTGGAATTGCAAGCGCTCACTATCAAGGATTGCCACTTGACGGAAAACTTGCCCTGCTAAATTACAACACGAGTT
TCTACCATTTTCTTGAACAGGAATCTCCTATAATATGCAGGTGTTACACTGATTTTACATCAAGCAAAACAAGTGACGAT
GCGGAAGCCTGTATCTATATGCAGGTCTTTCAATGGGGCAGGCTATGTGCGGATGCCATTCTGAAAGGATTCGCTTGCAC
CAATGCTGAACGTTATGAGCAAAAAGAGCAACGTTTGAAAAAAATTATAGAAAGACATAAGACCAATTTTGATTCGAAGC
TCAAAAGAATGTATGAATCAATGGTATCAACGCAATGCATGTAG

Upstream 100 bases:

>100_bases
AATTCTGGACAACCATGATGGACAAAAGCAGAAATTGAACTTGTTCATATAACGCTCGGCCATCATAACCATTGAAAAAG
CTTTTTTCATGAGCGCCAGT

Downstream 100 bases:

>100_bases
CAATCATTGGGGGCGGAATATCAGGTATTGCTGCTGCATTCTACCTTGCGCAGCAAAAAGTCAGCATTGATATTTTTGAA
TCAGAAAACCAAATTGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLGDACQPFLSQEYRRIHPGLYE
KLEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPIALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFN
IFSETAELKFDHQSPHVQGLLILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDD
AEACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYESMVSTQCM

Sequences:

>Translated_307_residues
MTQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLGDACQPFLSQEYRRIHPGLYE
KLEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPIALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFN
IFSETAELKFDHQSPHVQGLLILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDD
AEACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYESMVSTQCM
>Mature_306_residues
TQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLGDACQPFLSQEYRRIHPGLYEK
LEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPIALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFNI
FSETAELKFDHQSPHVQGLLILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDDA
EACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYESMVSTQCM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34542; Mature: 34411

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLG
CCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCHHHHCHHHHHH
DACQPFLSQEYRRIHPGLYEKLEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPI
HHCCHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCE
ALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFNIFSETAELKFDHQSPHVQGL
EECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEHHHHHHEEECCCCCCHHHH
LILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDD
HHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCC
AEACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYES
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MVSTQCM
HHHHCCC
>Mature Secondary Structure 
TQQTNHHSGTANGSRCVVLDTASYCLLLKGDSPPFSAEERSLLIAESPEEACDFQCLLG
CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCHHHHCHHHHHH
DACQPFLSQEYRRIHPGLYEKLEAIAISGWNNDAPFGIDTAAHLMKKLPLDLNCLINSPI
HHCCHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCE
ALSPNDPLPALIQKNLVHKHVEANVLVSEPFTAGRLRYFNIFSETAELKFDHQSPHVQGL
EECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEHHHHHHEEECCCCCCHHHH
LILEALRQAGIASAHYQGLPLDGKLALLNYNTSFYHFLEQESPIICRCYTDFTSSKTSDD
HHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCC
AEACIYMQVFQWGRLCADAILKGFACTNAERYEQKEQRLKKIIERHKTNFDSKLKRMYES
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MVSTQCM
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA