| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is yexA [H]
Identifier: 21674161
GI number: 21674161
Start: 1259615
End: 1259869
Strand: Reverse
Name: yexA [H]
Synonym: CT1339
Alternate gene names: 21674161
Gene position: 1259869-1259615 (Counterclockwise)
Preceding gene: 21674162
Following gene: 21674160
Centisome position: 58.46
GC content: 50.2
Gene sequence:
>255_bases ATGGCATTCAAGGCTAAGATCAAGGTGACCCTCCGTCCTTCAATTCTCGACGTTCAGGGTAAAGCCGCGCAGCATGCGCT TGAAAATCTCGGGTATTCGAGTGTCGAATCGATCAGGATCGGCAAATACATTGAGGTGATCATCGGTGAAGATTTCCGCG CTGAGGCCGAGCAAGTCTGCACTGAAATCTGTCAGAAGCTCCTGTCCAATCCGATTATGGAGGACTTCAGCTTCGAACTG GTACCCGTCAACTAA
Upstream 100 bases:
>100_bases TATTCTGCTCGGAATCGTCAGGTCGCTGACCCGTACCGTTCAGGAGTGGCAGCTCTGACGCAAAATTCCGCCCTCCTCAA CTTGCAACGTAACCATTGCT
Downstream 100 bases:
>100_bases ATTTCTCACCCTCCTATGGCTGATGTTACCGTTGGAATCGTGGTTTTCCCCGGTTCGAACTGCGATCACGACACCGAATA TGCCGTTGCTTCGTTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MAFKAKIKVTLRPSILDVQGKAAQHALENLGYSSVESIRIGKYIEVIIGEDFRAEAEQVCTEICQKLLSNPIMEDFSFEL VPVN
Sequences:
>Translated_84_residues MAFKAKIKVTLRPSILDVQGKAAQHALENLGYSSVESIRIGKYIEVIIGEDFRAEAEQVCTEICQKLLSNPIMEDFSFEL VPVN >Mature_83_residues AFKAKIKVTLRPSILDVQGKAAQHALENLGYSSVESIRIGKYIEVIIGEDFRAEAEQVCTEICQKLLSNPIMEDFSFELV PVN
Specific function: Unknown
COG id: COG1828
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0062 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003850 - ProDom: PD010362 [H]
Pfam domain/function: PF02700 PurS [H]
EC number: NA
Molecular weight: Translated: 9385; Mature: 9254
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKAKIKVTLRPSILDVQGKAAQHALENLGYSSVESIRIGKYIEVIIGEDFRAEAEQVC CCCEEEEEEEECCCEECCCCHHHHHHHHHCCCCCCCCEECCCEEEEEECCCCCHHHHHHH TEICQKLLSNPIMEDFSFELVPVN HHHHHHHHCCCCCCCCCEEEEECC >Mature Secondary Structure AFKAKIKVTLRPSILDVQGKAAQHALENLGYSSVESIRIGKYIEVIIGEDFRAEAEQVC CCEEEEEEEECCCEECCCCHHHHHHHHHCCCCCCCCEECCCEEEEEECCCCCHHHHHHH TEICQKLLSNPIMEDFSFELVPVN HHHHHHHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]