| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is pssA [H]
Identifier: 21674162
GI number: 21674162
Start: 1259912
End: 1260712
Strand: Reverse
Name: pssA [H]
Synonym: CT1340
Alternate gene names: 21674162
Gene position: 1260712-1259912 (Counterclockwise)
Preceding gene: 21674163
Following gene: 21674161
Centisome position: 58.5
GC content: 53.81
Gene sequence:
>801_bases ATGGGCACAGAAGAAAGAAAAGCTCGCCAAAAACGCTATCCACCGGTTTTACAGGATAGCGGCGAGCGGCCCCGGCGGCG TTTTCCCTACGTTTCGCGCTCATTCGTCCCGTCGGTTTTCACGGTCATGAACATGGTGTCGGGCTACGTTTCCATCGTCA TGGCGGGTGAGGGTAGTTTCGTCATTGCGGGATGGCTCATTTTCCTGGCCGCCTTTTTCGATACCATCGACGGTTTCGTG GCGAGACTCACCAACAGCTCCTCCGAATTTGGCGTGGAGCTCGATTCGCTTTCCGACCTTGTCTCTTTCGGAGCTGCGCC CGCATATCTCGTCTACAAATTCGGCCTCGAACATATTGGAATGCCTTGGGGGTTGCTGCTCAGCTCGCTCCTGATGGTTG GCAGCGGGTTGAGGCTGGCGCGATTCAACATCAATCTGATCGATTACCACAAGGACTCTTTTTCCGGTCTTCCGACACCG GCGCAGGCGATGACCGTCGCTTCGTTTGTCCTCTGGATGAGTGTTGAACCGCTGTTTACAGAACTCGCTCTTCAGAAGGT GCTGATGGTTCTGAGCGTTTTGCTCGCCACTCTCATGGTCAGCAAGGTCAACTACGATGCTTTGCCCAAACCGACTCTCG AATCGTTTCGCAGTCATCCCGTGCAGATGATTCTTTACGTGATCGCGATTTTCTGCGTGCTGGTCTTTCAGGCCAAGGCT TTTTTTGTGGCCATGTTATTGTATATTCTGCTCGGAATCGTCAGGTCGCTGACCCGTACCGTTCAGGAGTGGCAGCTCTG A
Upstream 100 bases:
>100_bases ATTATCTTTCATGACGATCTCCGCAATCGGGCTCCGGTATTTTTAACGTGCAGTGACAGGTTTGGCAGGAAATGGCGAAG TCGCCGGATGAATAATTTTT
Downstream 100 bases:
>100_bases CGCAAAATTCCGCCCTCCTCAACTTGCAACGTAACCATTGCTATGGCATTCAAGGCTAAGATCAAGGTGACCCTCCGTCC TTCAATTCTCGACGTTCAGG
Product: CDP-diacylglycerol-serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MGTEERKARQKRYPPVLQDSGERPRRRFPYVSRSFVPSVFTVMNMVSGYVSIVMAGEGSFVIAGWLIFLAAFFDTIDGFV ARLTNSSSEFGVELDSLSDLVSFGAAPAYLVYKFGLEHIGMPWGLLLSSLLMVGSGLRLARFNINLIDYHKDSFSGLPTP AQAMTVASFVLWMSVEPLFTELALQKVLMVLSVLLATLMVSKVNYDALPKPTLESFRSHPVQMILYVIAIFCVLVFQAKA FFVAMLLYILLGIVRSLTRTVQEWQL
Sequences:
>Translated_266_residues MGTEERKARQKRYPPVLQDSGERPRRRFPYVSRSFVPSVFTVMNMVSGYVSIVMAGEGSFVIAGWLIFLAAFFDTIDGFV ARLTNSSSEFGVELDSLSDLVSFGAAPAYLVYKFGLEHIGMPWGLLLSSLLMVGSGLRLARFNINLIDYHKDSFSGLPTP AQAMTVASFVLWMSVEPLFTELALQKVLMVLSVLLATLMVSKVNYDALPKPTLESFRSHPVQMILYVIAIFCVLVFQAKA FFVAMLLYILLGIVRSLTRTVQEWQL >Mature_265_residues GTEERKARQKRYPPVLQDSGERPRRRFPYVSRSFVPSVFTVMNMVSGYVSIVMAGEGSFVIAGWLIFLAAFFDTIDGFVA RLTNSSSEFGVELDSLSDLVSFGAAPAYLVYKFGLEHIGMPWGLLLSSLLMVGSGLRLARFNINLIDYHKDSFSGLPTPA QAMTVASFVLWMSVEPLFTELALQKVLMVLSVLLATLMVSKVNYDALPKPTLESFRSHPVQMILYVIAIFCVLVFQAKAF FVAMLLYILLGIVRSLTRTVQEWQL
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=148, Percent_Identity=39.1891891891892, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29719; Mature: 29587
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTEERKARQKRYPPVLQDSGERPRRRFPYVSRSFVPSVFTVMNMVSGYVSIVMAGEGSF CCCHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VIAGWLIFLAAFFDTIDGFVARLTNSSSEFGVELDSLSDLVSFGAAPAYLVYKFGLEHIG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHC MPWGLLLSSLLMVGSGLRLARFNINLIDYHKDSFSGLPTPAQAMTVASFVLWMSVEPLFT CCHHHHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELALQKVLMVLSVLLATLMVSKVNYDALPKPTLESFRSHPVQMILYVIAIFCVLVFQAKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FFVAMLLYILLGIVRSLTRTVQEWQL HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTEERKARQKRYPPVLQDSGERPRRRFPYVSRSFVPSVFTVMNMVSGYVSIVMAGEGSF CCHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VIAGWLIFLAAFFDTIDGFVARLTNSSSEFGVELDSLSDLVSFGAAPAYLVYKFGLEHIG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHC MPWGLLLSSLLMVGSGLRLARFNINLIDYHKDSFSGLPTPAQAMTVASFVLWMSVEPLFT CCHHHHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELALQKVLMVLSVLLATLMVSKVNYDALPKPTLESFRSHPVQMILYVIAIFCVLVFQAKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FFVAMLLYILLGIVRSLTRTVQEWQL HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]