| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674137
Identifier: 21674137
GI number: 21674137
Start: 1234338
End: 1235666
Strand: Direct
Name: 21674137
Synonym: CT1314
Alternate gene names: NA
Gene position: 1234338-1235666 (Clockwise)
Preceding gene: 21674136
Following gene: 21674138
Centisome position: 57.28
GC content: 53.05
Gene sequence:
>1329_bases TTGCTGTCGGTTTTTGTTGTAAATTTACGTTCAAACTCAGCACCTTTCTCCTTCAGTCGGCTTCTCATGCATACCACCAT TGTCAATGAAAGAAGTCTTCGTACCTGTAACTTCCCCATCACGTTGCAGGATATCAGGACGCTCAAGGAACTGTACCGGC TCAAGGCCGAAACGAGAGACCTGAGAAAGCCGATCGTCCGGAACATCATGAAGCAGCGGGTCGTCGGCAAAGGATGCCTC GAATCCCTGAAAAACGCCCTCTACTCCCTCGAAACCATTTACATCGACGACTATACAGGCCAAAGACTGCTTCGCATCGA TGGCATGAAGCAGATCGAGGTTGACCTGACCTACGAAATCCGCGAGCTGCAAAAGGATATTTACTACCTCGAATACGGCG AAGACCGCTTCATCGAGTACCTGGCGAAGTTCATTCCCGGCTTCACCGACTACGTCACCGAAGGGGTGGAGATGCTGCGA GGCAAATCGTTCAACGCATTTATCACCGACCGCGACGGCACCACCAACAACTACTGCGGACGCTATCGCTCCTCGATCCA GCCCATCTACAATTCGGTCTTCCTGTCGCGCTTCGCCAAAAACTGCTGCCGCTATCCGATGATCGTCACTTCGGCGCCGC TCAAGGATTTCGGCATCCTGAACGTCTCGATCAATCCCGAACACATCTTCGTCTATGCCGGCTCCAAAGGACGCGAGTTC ATCGACATCGACGGCCAGTTCCACAGCTTCCCGATTGAACCCGGCAAGCAGGAGCTGATCCGGCTGCTCAACGAACGAAT GCAACTGCTGCTGCTCGATCCATCGTTCGAGAAGTTCAACTTCATCGGTTCAGCATTGCAGATGAAGTTCGGCCAGACCA CCATTGCCCGCCAGGACATTACCCGCTCGGTCAACGAAGCTGAATCGGCAGCATTTCTTGAAAAAATCAAGGGCATCGTG CGCGACATCGATCCTGAAGGCAAGAACTTCAGGATCGAGGATACCGGCCTCGACATCGAGATCATCCTGACCATCGACGT CGATCCCAAAACGGGTATGATCCGCGATTTCGACAAGGGCGATGGACTCGAATTCATCTGCCGCAAGATGAATATCGACC ATACCGGAGAACCGGTACTGGTCTGCGGCGACACCTCTTCGGACATCCCGATGCTGAAAAAGGCGATGGAGATGTACGAC GATGTCTGGGCTATCTTTGTCACCCGGGATGAAAAGCTGATGCAGCGCGTCAGGGAAATCTGCCCAAAAAGCTATATGGT GCCCTACCCCGACATCCTTTTGACCATCCTCGGATTGCTCTCGCTCTGA
Upstream 100 bases:
>100_bases ACGCGCTCTGCACAAAAACCGCATAAAAAGAGCGCTCCGGAACCGTAAACAGCTTTAGCTTGTTCTCTGACTGACTGATA TAGATGTTTATTTTACTGGA
Downstream 100 bases:
>100_bases ACGTCACTTTCACCGATAATCCTCTAACTGTTTTCATGGAATGAGTATGAATTTCAAAGGCGTCATTTTCGATCTCGACG GAGTCATCACCGGCACGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRDLRKPIVRNIMKQRVVGKGCL ESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEIRELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLR GKSFNAFITDRDGTTNNYCGRYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDITRSVNEAESAAFLEKIKGIV RDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKGDGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYD DVWAIFVTRDEKLMQRVREICPKSYMVPYPDILLTILGLLSL
Sequences:
>Translated_442_residues MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRDLRKPIVRNIMKQRVVGKGCL ESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEIRELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLR GKSFNAFITDRDGTTNNYCGRYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDITRSVNEAESAAFLEKIKGIV RDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKGDGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYD DVWAIFVTRDEKLMQRVREICPKSYMVPYPDILLTILGLLSL >Mature_442_residues MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRDLRKPIVRNIMKQRVVGKGCL ESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEIRELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLR GKSFNAFITDRDGTTNNYCGRYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDITRSVNEAESAAFLEKIKGIV RDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKGDGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYD DVWAIFVTRDEKLMQRVREICPKSYMVPYPDILLTILGLLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI71987012, Length=420, Percent_Identity=33.8095238095238, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI115533560, Length=427, Percent_Identity=29.9765807962529, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI115533558, Length=427, Percent_Identity=29.9765807962529, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI133963234, Length=274, Percent_Identity=29.1970802919708, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17568475, Length=431, Percent_Identity=25.5220417633411, Blast_Score=118, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51010; Mature: 51010
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRD CEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHH LRKPIVRNIMKQRVVGKGCLESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCEEEEEEEEHHH RELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLRGKSFNAFITDRDGTTNNYCG HHHHHHHEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH RYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCEEEEEECCCCCEE IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDI EEECCCEEECCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHH TRSVNEAESAAFLEKIKGIVRDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCC DGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYDDVWAIFVTRDEKLMQRVREI CCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHH CPKSYMVPYPDILLTILGLLSL CCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLSVFVVNLRSNSAPFSFSRLLMHTTIVNERSLRTCNFPITLQDIRTLKELYRLKAETRD CEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHH LRKPIVRNIMKQRVVGKGCLESLKNALYSLETIYIDDYTGQRLLRIDGMKQIEVDLTYEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCEEEEEEEEHHH RELQKDIYYLEYGEDRFIEYLAKFIPGFTDYVTEGVEMLRGKSFNAFITDRDGTTNNYCG HHHHHHHEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH RYRSSIQPIYNSVFLSRFAKNCCRYPMIVTSAPLKDFGILNVSINPEHIFVYAGSKGREF HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCEEEEEECCCCCEE IDIDGQFHSFPIEPGKQELIRLLNERMQLLLLDPSFEKFNFIGSALQMKFGQTTIARQDI EEECCCEEECCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHH TRSVNEAESAAFLEKIKGIVRDIDPEGKNFRIEDTGLDIEIILTIDVDPKTGMIRDFDKG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCC DGLEFICRKMNIDHTGEPVLVCGDTSSDIPMLKKAMEMYDDVWAIFVTRDEKLMQRVREI CCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHH CPKSYMVPYPDILLTILGLLSL CCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA