| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674125
Identifier: 21674125
GI number: 21674125
Start: 1224920
End: 1225618
Strand: Reverse
Name: 21674125
Synonym: CT1302
Alternate gene names: NA
Gene position: 1225618-1224920 (Counterclockwise)
Preceding gene: 21674126
Following gene: 21674121
Centisome position: 56.87
GC content: 59.8
Gene sequence:
>699_bases ATGATCAAAACAATTCAATCCCGTCTCGAATCTCTCGCCGACGAGCCAACGGCGGGAATTCTCCGTCGCTTTTTCAAGAC CGGTCCCGGTGAGTATGGCGAGGGCGACCGGTTTCGCGGCATTCGTGTGCCGGTACTTCGCAAGCTCTGCCGCGAGTTCC TGCACGCGGGCGTCGAGGTGATCTCGGAGCTGCTTGACTCGCCGTGGCACGAAGACCGGATGCTTGCGTTGCTGCTGCTC ATCGAGCGTTACCAGTCGTCAAGCGAGAGCGGCAGGGAGGCGCTGTACGAGTTCTACTGCACGCTAACCGGCCGTATCAA TAACTGGGACCTGGTTGATCTTTCCGCACCCTGCATCGTTGGCCGCCATCTCCACACTCGCGACCGCTCGCGGCTTTACC GCTTCGTCGAATCGTCCAGCCTCTGGGAGCGCCGCATCGCTATCGTTTCGACCTTCCACTTCATTCGTAACAACGACTTC TCCGACACTCTTGCCTTGGCCGAACGCCTGCTCACCGACCCCGAAGAGCTGCTCCACAAAGCCACCGGATGGATGCTCCG CGAAGTTGGCAAACGCGATCAGCCATTGCTCGAAGCCTTCCTTGAGCACTACGCTATCGCCATGCCCCGTACGATGCTGC GCTACGCCATCGAGCGCTTCCCGGAGGATGAGCGAAAGGGGTGGTTAAAGCGGCGTTGA
Upstream 100 bases:
>100_bases TTGGGCGACGAACTGCACAAAATTCAGACGAAGCTCGACAAAGACATGGAGCGCTGGGCGGAGTTGGCCGAACTGGCGTG AACCTTGAGCAGAGAACCCG
Downstream 100 bases:
>100_bases TCCTCGGAGCGCCATGCCTCAGCCTGGTAGTGGAGCCGAATGCTTCACGTTTTGAGTGGGCAGCCAAGAGGCTTCGGAAA TTGTGGACTGGAGAGACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Alkylation Repair Protein; DNA Alkylation Repair Superfamily; Glucose/Ribitol Dehydrogenase
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MIKTIQSRLESLADEPTAGILRRFFKTGPGEYGEGDRFRGIRVPVLRKLCREFLHAGVEVISELLDSPWHEDRMLALLLL IERYQSSSESGREALYEFYCTLTGRINNWDLVDLSAPCIVGRHLHTRDRSRLYRFVESSSLWERRIAIVSTFHFIRNNDF SDTLALAERLLTDPEELLHKATGWMLREVGKRDQPLLEAFLEHYAIAMPRTMLRYAIERFPEDERKGWLKRR
Sequences:
>Translated_232_residues MIKTIQSRLESLADEPTAGILRRFFKTGPGEYGEGDRFRGIRVPVLRKLCREFLHAGVEVISELLDSPWHEDRMLALLLL IERYQSSSESGREALYEFYCTLTGRINNWDLVDLSAPCIVGRHLHTRDRSRLYRFVESSSLWERRIAIVSTFHFIRNNDF SDTLALAERLLTDPEELLHKATGWMLREVGKRDQPLLEAFLEHYAIAMPRTMLRYAIERFPEDERKGWLKRR >Mature_232_residues MIKTIQSRLESLADEPTAGILRRFFKTGPGEYGEGDRFRGIRVPVLRKLCREFLHAGVEVISELLDSPWHEDRMLALLLL IERYQSSSESGREALYEFYCTLTGRINNWDLVDLSAPCIVGRHLHTRDRSRLYRFVESSSLWERRIAIVSTFHFIRNNDF SDTLALAERLLTDPEELLHKATGWMLREVGKRDQPLLEAFLEHYAIAMPRTMLRYAIERFPEDERKGWLKRR
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27268; Mature: 27268
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTIQSRLESLADEPTAGILRRFFKTGPGEYGEGDRFRGIRVPVLRKLCREFLHAGVEV CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ISELLDSPWHEDRMLALLLLIERYQSSSESGREALYEFYCTLTGRINNWDLVDLSAPCIV HHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHH GRHLHTRDRSRLYRFVESSSLWERRIAIVSTFHFIRNNDFSDTLALAERLLTDPEELLHK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH ATGWMLREVGKRDQPLLEAFLEHYAIAMPRTMLRYAIERFPEDERKGWLKRR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC >Mature Secondary Structure MIKTIQSRLESLADEPTAGILRRFFKTGPGEYGEGDRFRGIRVPVLRKLCREFLHAGVEV CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ISELLDSPWHEDRMLALLLLIERYQSSSESGREALYEFYCTLTGRINNWDLVDLSAPCIV HHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHH GRHLHTRDRSRLYRFVESSSLWERRIAIVSTFHFIRNNDFSDTLALAERLLTDPEELLHK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH ATGWMLREVGKRDQPLLEAFLEHYAIAMPRTMLRYAIERFPEDERKGWLKRR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA