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The map label for this gene is yfmR [H]

Identifier: 21674126

GI number: 21674126

Start: 1225638

End: 1227542

Strand: Reverse

Name: yfmR [H]

Synonym: CT1303

Alternate gene names: 21674126

Gene position: 1227542-1225638 (Counterclockwise)

Preceding gene: 21674129

Following gene: 21674125

Centisome position: 56.96

GC content: 61.42

Gene sequence:

>1905_bases
ATGGTATTACTGACGGTTGAGGGGATTACCAAGAGGTATGGTTTGAAAACGCTTTTCGAGGAGGTGTCGTTCGGCATCGA
TGACCGCGACAAGGTTGGCATCATCGGTGCGAACGGCAGCGGCAAAAGCACGCTGATGAAAATCCTCGCCGGGAGCGAGA
CGCCCGACACCGGGAGGGTGATGGTGTCGAAGGAAAAGAAAATCTCCTACCTGCCGCAGGTCTCGCCGTACGACGCGGAC
GACACGGTGCTCGAAGCGGTGCTCAAGTCGGGCGACAAGGTGATGGCGCTCATCTGCGAGTACGAACTGGCTCTTGAGGC
GCTTGACCATGCAGAGGGCGACCAGACCGCGCTGATCGAGAAGGTGACGCACCTGTCGCACGAACTCGACGTGAGCGGCG
CGTGGGAGCTGGAGTCGAACGCCAAGGCGGTGCTCGGCAAACTCGGCCTGAACGACCTGACGGCGAAGATGGGCACGCTT
TCCGGCGGCCAGCGCAAGCGTGTGGCGCTTGCTCACGCCCTCGTGGTGCCGAGCGATGCGCTGATTCTCGACGAGCCGAC
CAACCACCTCGATGCCGACAGCGTCGAGTGGCTCGAAAGCTACATCCGCCGCTACGCCGGGGCGGTGATTCTCATCACGC
ACGACCGCTACTTCCTCGACCGTGTTGCCACCCGTATGATCGAACTCGACGGCAAAACAGCCAAAACCTACACCGGCGGC
TACGCGAGCTACCTCGTCCAGAAGGAGGCGGAGGAGGCGCAGGAGATTCGCGACGAGCGCAAGCGCAACGCCCTGGCAAA
GCAGGAGCTTGAATGGATGCGCACTGGCGCGAAGGCGCGCACCACCAAGCAGAAGGCACGCTTGCAGCGAGCCGAAACGC
TGGTCTATGCGCCGAAAAAGGCAGAGAAGCAGGAGATGGAGATCGGCTTCGGCGCGGAGCGGCTCGGCAACAAGATCGTC
GAGTTCCACGACGTCTCGAAATCGTGGGGCCAGAAAAAGCTGCTTCGCTCGTTCGACTACCTGCTCGAAAAGGGCGATCG
CATCGGCATCATCGGCCCGAACGGCTCCGGCAAGACCACGCTGCTCGAAATGATTGCCGGGCGCACGAAGCCCGACACCG
GGCGCATCGAGATCGGCCCTACGGTCAAGATTGGCTACTACGACCAGGAGAGCCGTCACCTCGACGACTCGAAGCGCGTG
ATCGAGTATATCAAGGAGGAGGCCGAGCAGATAAAGACCAAGGATGGCACGCTGGTCTCCGCGGCCAAGATGCTCGAACG
GTTCCTCTTTTCAGGGGCAGCGCAGTACAACCCCATCGGCAATCTTTCGGGCGGCGAGCGTCGTCGGCTCTATCTGTTGC
GCCAGCTCATCGGTGCGCCGAACGTGCTCTTGCTCGACGAGCCGACCAACGACCTCGACATTCCAACCCTGCGCGTGCTC
GAAGACTACCTCGACACCTTTCCGGGGTGCCTCGTTGTCGTGAGCCACGACCGCTACTTCCTCGACCGCACCGTCGAGCA
CATCTTCGCCTTCGAGGGCGACGGCATCGTGCGCCGTTACCCTGGCAACTACAGCGTCTATCTCGAAATGAAAGCCGCAA
TCGCCGCCGAAGAGCAAGCCGCCAAGCAGAAACCTGCGCCCGCAGCCAAACCCGCGTCCGAAGCGCCGAAGCCGACATTG
TCGCCGAAACAGCGCAAACTCAACAGCAAGGAGAAGCGCGAACTTGAGCAGCTCGAACAGGCCATCGCCGAAGCCGAAGA
GCGGCAGGAAGCGATCAACGCCGAACTTGCCGCCGCCGGTTCGGATTTCGATGCGGTGCAAAAGTTGGGCGACGAACTGC
ACAAAATTCAGACGAAGCTCGACAAAGACATGGAGCGCTGGGCGGAGTTGGCCGAACTGGCGTGA

Upstream 100 bases:

>100_bases
GATTTTATTGTATGGAAAAAAATGATGATATGGAAACGAAGCTCCGGCTGGAAAGAGGAATGGTATATTGAGGCTTTTTC
AGGGCTAAACAAGGGCGGAC

Downstream 100 bases:

>100_bases
ACCTTGAGCAGAGAACCCGATGATCAAAACAATTCAATCCCGTCTCGAATCTCTCGCCGACGAGCCAACGGCGGGAATTC
TCCGTCGCTTTTTCAAGACC

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MVLLTVEGITKRYGLKTLFEEVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRVMVSKEKKISYLPQVSPYDAD
DTVLEAVLKSGDKVMALICEYELALEALDHAEGDQTALIEKVTHLSHELDVSGAWELESNAKAVLGKLGLNDLTAKMGTL
SGGQRKRVALAHALVVPSDALILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
YASYLVQKEAEEAQEIRDERKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKKAEKQEMEIGFGAERLGNKIV
EFHDVSKSWGQKKLLRSFDYLLEKGDRIGIIGPNGSGKTTLLEMIAGRTKPDTGRIEIGPTVKIGYYDQESRHLDDSKRV
IEYIKEEAEQIKTKDGTLVSAAKMLERFLFSGAAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAAIAAEEQAAKQKPAPAAKPASEAPKPTL
SPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELAAAGSDFDAVQKLGDELHKIQTKLDKDMERWAELAELA

Sequences:

>Translated_634_residues
MVLLTVEGITKRYGLKTLFEEVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRVMVSKEKKISYLPQVSPYDAD
DTVLEAVLKSGDKVMALICEYELALEALDHAEGDQTALIEKVTHLSHELDVSGAWELESNAKAVLGKLGLNDLTAKMGTL
SGGQRKRVALAHALVVPSDALILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
YASYLVQKEAEEAQEIRDERKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKKAEKQEMEIGFGAERLGNKIV
EFHDVSKSWGQKKLLRSFDYLLEKGDRIGIIGPNGSGKTTLLEMIAGRTKPDTGRIEIGPTVKIGYYDQESRHLDDSKRV
IEYIKEEAEQIKTKDGTLVSAAKMLERFLFSGAAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAAIAAEEQAAKQKPAPAAKPASEAPKPTL
SPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELAAAGSDFDAVQKLGDELHKIQTKLDKDMERWAELAELA
>Mature_634_residues
MVLLTVEGITKRYGLKTLFEEVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRVMVSKEKKISYLPQVSPYDAD
DTVLEAVLKSGDKVMALICEYELALEALDHAEGDQTALIEKVTHLSHELDVSGAWELESNAKAVLGKLGLNDLTAKMGTL
SGGQRKRVALAHALVVPSDALILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
YASYLVQKEAEEAQEIRDERKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKKAEKQEMEIGFGAERLGNKIV
EFHDVSKSWGQKKLLRSFDYLLEKGDRIGIIGPNGSGKTTLLEMIAGRTKPDTGRIEIGPTVKIGYYDQESRHLDDSKRV
IEYIKEEAEQIKTKDGTLVSAAKMLERFLFSGAAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAAIAAEEQAAKQKPAPAAKPASEAPKPTL
SPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELAAAGSDFDAVQKLGDELHKIQTKLDKDMERWAELAELA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=556, Percent_Identity=29.8561151079137, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=30.2803738317757, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI148612853, Length=542, Percent_Identity=28.2287822878229, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI10947135, Length=537, Percent_Identity=30.1675977653631, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI69354671, Length=537, Percent_Identity=30.1675977653631, Blast_Score=180, Evalue=4e-45,
Organism=Homo sapiens, GI27436953, Length=155, Percent_Identity=32.9032258064516, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI27477115, Length=153, Percent_Identity=31.3725490196078, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI6005701, Length=153, Percent_Identity=30.718954248366, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI2367384, Length=528, Percent_Identity=41.8560606060606, Blast_Score=374, Evalue=1e-104,
Organism=Escherichia coli, GI1787182, Length=653, Percent_Identity=33.9969372128637, Blast_Score=340, Evalue=2e-94,
Organism=Escherichia coli, GI1789751, Length=622, Percent_Identity=32.1543408360129, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=30.7407407407407, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI48994943, Length=497, Percent_Identity=22.5352112676056, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=29.2079207920792, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI87081834, Length=240, Percent_Identity=30, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788761, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786698, Length=163, Percent_Identity=30.0613496932515, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788225, Length=209, Percent_Identity=28.2296650717703, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788053, Length=170, Percent_Identity=31.7647058823529, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786703, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081782, Length=182, Percent_Identity=31.3186813186813, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1787370, Length=200, Percent_Identity=27, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786563, Length=169, Percent_Identity=31.3609467455621, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1787712, Length=230, Percent_Identity=28.2608695652174, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=525, Percent_Identity=29.1428571428571, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI17555318, Length=530, Percent_Identity=28.4905660377358, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=28.6506469500924, Blast_Score=179, Evalue=4e-45,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=31.0734463276836, Blast_Score=218, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=27.9707495429616, Blast_Score=174, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6325030, Length=392, Percent_Identity=26.7857142857143, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6323278, Length=407, Percent_Identity=26.2899262899263, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=403, Percent_Identity=25.5583126550869, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24642252, Length=539, Percent_Identity=28.5714285714286, Blast_Score=198, Evalue=8e-51,
Organism=Drosophila melanogaster, GI18859989, Length=539, Percent_Identity=28.5714285714286, Blast_Score=198, Evalue=8e-51,
Organism=Drosophila melanogaster, GI24641342, Length=557, Percent_Identity=28.1867145421903, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24666836, Length=538, Percent_Identity=27.3234200743494, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI161076682, Length=208, Percent_Identity=32.2115384615385, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161076684, Length=208, Percent_Identity=32.2115384615385, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581617, Length=208, Percent_Identity=32.2115384615385, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581615, Length=208, Percent_Identity=32.2115384615385, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574259, Length=239, Percent_Identity=28.0334728033473, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581191, Length=155, Percent_Identity=31.6129032258064, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581189, Length=155, Percent_Identity=31.6129032258064, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581193, Length=155, Percent_Identity=31.6129032258064, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581195, Length=155, Percent_Identity=31.6129032258064, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70538; Mature: 70538

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLTVEGITKRYGLKTLFEEVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRV
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCE
MVSKEKKISYLPQVSPYDADDTVLEAVLKSGDKVMALICEYELALEALDHAEGDQTALIE
EEECCCHHHCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHH
KVTHLSHELDVSGAWELESNAKAVLGKLGLNDLTAKMGTLSGGQRKRVALAHALVVPSDA
HHHHHHHHCCCCCCEEECCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
LILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
EEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCH
YASYLVQKEAEEAQEIRDERKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCC
AEKQEMEIGFGAERLGNKIVEFHDVSKSWGQKKLLRSFDYLLEKGDRIGIIGPNGSGKTT
CCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
LLEMIAGRTKPDTGRIEIGPTVKIGYYDQESRHLDDSKRVIEYIKEEAEQIKTKDGTLVS
HHHHHHCCCCCCCCEEEECCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH
AAKMLERFLFSGAAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAAIAAEEQA
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHH
AKQKPAPAAKPASEAPKPTLSPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELAAAG
HHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDFDAVQKLGDELHKIQTKLDKDMERWAELAELA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLLTVEGITKRYGLKTLFEEVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRV
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCE
MVSKEKKISYLPQVSPYDADDTVLEAVLKSGDKVMALICEYELALEALDHAEGDQTALIE
EEECCCHHHCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHH
KVTHLSHELDVSGAWELESNAKAVLGKLGLNDLTAKMGTLSGGQRKRVALAHALVVPSDA
HHHHHHHHCCCCCCEEECCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
LILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
EEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCH
YASYLVQKEAEEAQEIRDERKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCC
AEKQEMEIGFGAERLGNKIVEFHDVSKSWGQKKLLRSFDYLLEKGDRIGIIGPNGSGKTT
CCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
LLEMIAGRTKPDTGRIEIGPTVKIGYYDQESRHLDDSKRVIEYIKEEAEQIKTKDGTLVS
HHHHHHCCCCCCCCEEEECCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH
AAKMLERFLFSGAAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAAIAAEEQA
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHH
AKQKPAPAAKPASEAPKPTLSPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELAAAG
HHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDFDAVQKLGDELHKIQTKLDKDMERWAELAELA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]