| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is thiE
Identifier: 21674001
GI number: 21674001
Start: 1104770
End: 1105384
Strand: Direct
Name: thiE
Synonym: CT1175
Alternate gene names: 21674001
Gene position: 1104770-1105384 (Clockwise)
Preceding gene: 21674000
Following gene: 21674002
Centisome position: 51.27
GC content: 59.84
Gene sequence:
>615_bases ATGACGTTACCGCGAAGAGTTCTCTGCGTCATCACCGATGAACACTCCAATCCAGTCGAACTTGCCCGCATGGCCCTCCA GGGCGGGGCAGGGATGGTACAGTTACGAAGAAAAACAGCCTCGGGCCAAGAGCTTTACGAGTGGGCCATCAGAATTCAAG CGCTTTGCAGTGAACAGCAGGCGCTCTTCATCGTCAATGACCGGGTCGATATTGCCATGGCCGTACATGCCGATGGAGTG CACCTCGGCCAACAGGATCTGCCCGCGTCGGCTGCCCGCGCACTGCTTGCCCCCGATGCGATCATTGGCGTATCGGTCTC CAACGCCACCGAGGCTATCAAGGCAGCCGAAGAGGGCGCAAGCTATATCGGCGTGGGGCACATATTCCCGACTTTTTCCA AAGACAAACCTTCAGAGCCGCTCGGCACGGCATCTATACGACCGATCGGCAGGGCTGCGCAGCTGCCGGTCATCGCCATC GGCGGCATCGGGCACGACAACGCTGCCGAGGTCATCCGTGCCGGTGCATCAGGCATCGCCGTCATCTCCGCGGTTTCCGA CAGCGACGATCCCGAGACCGCCACTCGCGAGCTGGTAAGAAGAATCAGGCAATAA
Upstream 100 bases:
>100_bases GCATCGAATGCGGAGCCTGGGGCGTAGCCGCCCTCACACCGTTTCTCGATGCCGGATCGCTGCCTGAAACCGTCAACCGC TTCTACTCATTCATGCAATC
Downstream 100 bases:
>100_bases ATATGATGCAGAACTACATCACCGTGCTGACCATCGCCGGATCGGACGGCAGCGGCGGAGCTGGCATCCAGACCGACCTG AAAACCATCGCCGCCAACAA
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTLPRRVLCVITDEHSNPVELARMALQGGAGMVQLRRKTASGQELYEWAIRIQALCSEQQALFIVNDRVDIAMAVHADGV HLGQQDLPASAARALLAPDAIIGVSVSNATEAIKAAEEGASYIGVGHIFPTFSKDKPSEPLGTASIRPIGRAAQLPVIAI GGIGHDNAAEVIRAGASGIAVISAVSDSDDPETATRELVRRIRQ
Sequences:
>Translated_204_residues MTLPRRVLCVITDEHSNPVELARMALQGGAGMVQLRRKTASGQELYEWAIRIQALCSEQQALFIVNDRVDIAMAVHADGV HLGQQDLPASAARALLAPDAIIGVSVSNATEAIKAAEEGASYIGVGHIFPTFSKDKPSEPLGTASIRPIGRAAQLPVIAI GGIGHDNAAEVIRAGASGIAVISAVSDSDDPETATRELVRRIRQ >Mature_203_residues TLPRRVLCVITDEHSNPVELARMALQGGAGMVQLRRKTASGQELYEWAIRIQALCSEQQALFIVNDRVDIAMAVHADGVH LGQQDLPASAARALLAPDAIIGVSVSNATEAIKAAEEGASYIGVGHIFPTFSKDKPSEPLGTASIRPIGRAAQLPVIAIG GIGHDNAAEVIRAGASGIAVISAVSDSDDPETATRELVRRIRQ
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=184, Percent_Identity=35.8695652173913, Blast_Score=96, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6325042, Length=191, Percent_Identity=33.5078534031414, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_CHLTE (Q8KD79)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662066.1 - ProteinModelPortal: Q8KD79 - SMR: Q8KD79 - GeneID: 1006539 - GenomeReviews: AE006470_GR - KEGG: cte:CT1175 - NMPDR: fig|194439.1.peg.1160 - TIGR: CT1175 - HOGENOM: HBG754477 - OMA: IMGSNNC - ProtClustDB: CLSK637633 - BioCyc: CTEP194439:CT_1175-MONOMER - BRENDA: 2.5.1.3 - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 21475; Mature: 21344
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPRRVLCVITDEHSNPVELARMALQGGAGMVQLRRKTASGQELYEWAIRIQALCSEQQ CCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHHHHHHHHCCCC ALFIVNDRVDIAMAVHADGVHLGQQDLPASAARALLAPDAIIGVSVSNATEAIKAAEEGA EEEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCC SYIGVGHIFPTFSKDKPSEPLGTASIRPIGRAAQLPVIAIGGIGHDNAAEVIRAGASGIA CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEE VISAVSDSDDPETATRELVRRIRQ EEEECCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TLPRRVLCVITDEHSNPVELARMALQGGAGMVQLRRKTASGQELYEWAIRIQALCSEQQ CCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHHHHHHHHCCCC ALFIVNDRVDIAMAVHADGVHLGQQDLPASAARALLAPDAIIGVSVSNATEAIKAAEEGA EEEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCC SYIGVGHIFPTFSKDKPSEPLGTASIRPIGRAAQLPVIAIGGIGHDNAAEVIRAGASGIA CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEE VISAVSDSDDPETATRELVRRIRQ EEEECCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901