Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673995

Identifier: 21673995

GI number: 21673995

Start: 1099692

End: 1100330

Strand: Reverse

Name: 21673995

Synonym: CT1169

Alternate gene names: NA

Gene position: 1100330-1099692 (Counterclockwise)

Preceding gene: 21673996

Following gene: 21673993

Centisome position: 51.06

GC content: 53.68

Gene sequence:

>639_bases
ATGGATGTAGCAAGCGCCCTTGAGGGCAACTGGGAATTTCGGGTCGATCACAAGAACATCAAGATTTTTTCGTCGAAGAT
CAGAGGTTCCCAGGTGCTGGGTTTCAAGGGGGAGGCCGTGTTCGAGGCGTCTCTCAGAAAGCTGATCAGCCTTTTTCACG
ATTTTGGCAATTACGGGAAATGGGTGCATCAGCTTTCTGAGATGGAGGTGTTGCACAAGAGCGATGAGCTTGATTATGTC
GTTCGCCAGGTGCTCAACACTCCTTGGCCGATTCCTAAAAGGGAGATGATCGTGCGCACCGCCCTGCACGCTTCCGAAGA
GGGGGCGCTAGCCCTGACGATGACCGGTATTCCCGATTATGTTCCGTTGAAGCCTGATTTTCATCGTGTGCGCGAGGCCA
GGGGGGGCTGGATATTGATGCCTGTGGATGGCGGCAAGGTACATGTGACTTTCGTGATGCATCTCGATCCCGGCAGCGAT
ATCCCGCCCGCGCTTAGCAATGCAGCCCTCTTCGAGGTGCCGTTTTACTCATTGCTCAAGATGAGGGATCTTGCACAGAA
TCCTTCCTACAAACCGGCGTGGCCTTCGGTGGTGGATAACCACGTCACCATCATTGAAGATGTGCCAGACAAGCACTGA

Upstream 100 bases:

>100_bases
CTTGAAGGAATCGACGGAGGGCATCATCAGGAACTACAACGATTTCATCACCGAGTAATCCGCCGGGTCTGGCTCAATCA
TTACCATAACTGCCAAGTCA

Downstream 100 bases:

>100_bases
AGAGCTTGTCCGGTCTGACCGGCACGGCACCGACCTCCTGGCAGACAGTATTGGCCGCAAGATTGGCGATTCTGGTGCTG
GTCACCAGGTCGAGGCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGKWVHQLSEMEVLHKSDELDYV
VRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDYVPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSD
IPPALSNAALFEVPFYSLLKMRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH

Sequences:

>Translated_212_residues
MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGKWVHQLSEMEVLHKSDELDYV
VRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDYVPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSD
IPPALSNAALFEVPFYSLLKMRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH
>Mature_212_residues
MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGKWVHQLSEMEVLHKSDELDYV
VRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDYVPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSD
IPPALSNAALFEVPFYSLLKMRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH

Specific function: May play a role in the interaction of the bacterium with animal cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 START domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002913 [H]

Pfam domain/function: PF01852 START [H]

EC number: NA

Molecular weight: Translated: 23965; Mature: 23965

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50848 START

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGK
CCCCHHHCCCEEEEEECCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
WVHQLSEMEVLHKSDELDYVVRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDY
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC
VPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSDIPPALSNAALFEVPFYSLLK
CCCCCCHHHHHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCEEEECHHHHHHH
MRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH
HHHHHCCCCCCCCCCHHHCCCEEEEECCCCCC
>Mature Secondary Structure
MDVASALEGNWEFRVDHKNIKIFSSKIRGSQVLGFKGEAVFEASLRKLISLFHDFGNYGK
CCCCHHHCCCEEEEEECCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
WVHQLSEMEVLHKSDELDYVVRQVLNTPWPIPKREMIVRTALHASEEGALALTMTGIPDY
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC
VPLKPDFHRVREARGGWILMPVDGGKVHVTFVMHLDPGSDIPPALSNAALFEVPFYSLLK
CCCCCCHHHHHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCEEEECHHHHHHH
MRDLAQNPSYKPAWPSVVDNHVTIIEDVPDKH
HHHHHCCCCCCCCCCHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 11276083 [H]