| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673984
Identifier: 21673984
GI number: 21673984
Start: 1088916
End: 1089146
Strand: Direct
Name: 21673984
Synonym: CT1158
Alternate gene names: NA
Gene position: 1088916-1089146 (Clockwise)
Preceding gene: 21673983
Following gene: 21673985
Centisome position: 50.53
GC content: 54.98
Gene sequence:
>231_bases ATGAGCAAGAAGATGATTTGCTACTGCAGTAGTGTGACGGAGGAGACAATCGTCTCGGCGATCCGCCGAGGCGCAACCAC CCTCAAGAAGATTCAGGACACAACGGGTGCCTGCACCGTCAACCGTTGCAAGGAGTTGAACCCAAGTGGTCGCTGCTGCT CTGGCGACATTCTTGACCTGATCGAGAGAGAAACAGGAAGCAGACCATCGTCACCGTGCTGCTGTGAGTGA
Upstream 100 bases:
>100_bases AGACTACTGGATATTTGGAAATAAGGAAATCAGATAACAAGATCAATACAGCCGATCGCTACGCTCCGGCTGATTTAATA GTTAGTTAGCAGAAAAAAAG
Downstream 100 bases:
>100_bases TGGGCTGCCAACAACCGAATCGATTCGCACGCTGAAAGCCGCGCCAGCTCGCCACCCAGCGACGGTCATTCAGGCGTTAG CCCGCAGTGACCAAGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSKKMICYCSSVTEETIVSAIRRGATTLKKIQDTTGACTVNRCKELNPSGRCCSGDILDLIERETGSRPSSPCCCE
Sequences:
>Translated_76_residues MSKKMICYCSSVTEETIVSAIRRGATTLKKIQDTTGACTVNRCKELNPSGRCCSGDILDLIERETGSRPSSPCCCE >Mature_75_residues SKKMICYCSSVTEETIVSAIRRGATTLKKIQDTTGACTVNRCKELNPSGRCCSGDILDLIERETGSRPSSPCCCE
Specific function: Unknown
COG id: COG0579
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8238; Mature: 8106
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 14.5 %Cys+Met (Translated Protein) 12.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 13.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKMICYCSSVTEETIVSAIRRGATTLKKIQDTTGACTVNRCKELNPSGRCCSGDILDL CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHCCCCCCCCCCCHHHHH IERETGSRPSSPCCCE HHHHCCCCCCCCCCCC >Mature Secondary Structure SKKMICYCSSVTEETIVSAIRRGATTLKKIQDTTGACTVNRCKELNPSGRCCSGDILDL CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHCCCCCCCCCCCHHHHH IERETGSRPSSPCCCE HHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA