| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673983
Identifier: 21673983
GI number: 21673983
Start: 1088159
End: 1088839
Strand: Direct
Name: 21673983
Synonym: CT1157
Alternate gene names: NA
Gene position: 1088159-1088839 (Clockwise)
Preceding gene: 21673982
Following gene: 21673984
Centisome position: 50.5
GC content: 40.38
Gene sequence:
>681_bases ATGAACAGAATCAAAGTTAGTGGATTATTTCTAATCTTTCTTGTTATAACGGCTACGCTACAATTAAGTGGATGTGCAAC TGTGCCATCAACACCTACTGATCCGAGAATGTTGGGATATGATGAAAGGGTCGAGGTAACGGTACAGGCGCTAGCTGCTC CTGATGCCCCATCAAATGATAAGAGTTTTTTCATAGTACCAGGAATGCAGAATCTCAGCGAAAATGATCTTGAATTTATG GAGGTTTCCAGATACATTACAAACGCGCTATCCAAAAAAGGTTATATCCGCGCTAACAGCGTAAAGTCCGCAGCTATTCT TATCCGTTTGAGCTATGGTATTGGAGATCCTCAAACAAGCTCCCGGACCGTTGAAATTTCCCCAGGGTATAGCTACCCTG TCGGATGGATGTGGTTTACGCAACCACCCCAAACTCAAACAGTTAAAGAAACAACCTACCAAAGAAATTTGATATTAGAA GCGTATGACTTAAAAGATCCAAACAGAAAATCACAACTCTGGAAAACAATCGTGAAAAGCGAAGGTTCCTATTCTGATCT AAATCGTATTCTTGCGTATATGATTGCAGCTTCATCTGAATATTTTGGCACAAATACAGGCAGGCAGATAGATTTAACTA TTTATGGGCACGACCCAAGACTACTGGATATTTGGAAATAA
Upstream 100 bases:
>100_bases GTTTCGTTACAGCTCAATGTTGATGAGCGTCACATAAAACGAGATATGAAGAAACGAACTAATAACTTGTTATCATCAGA ACAGATTATAAGGAGGCAAT
Downstream 100 bases:
>100_bases GGAAATCAGATAACAAGATCAATACAGCCGATCGCTACGCTCCGGCTGATTTAATAGTTAGTTAGCAGAAAAAAAGATGA GCAAGAAGATGATTTGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSNDKSFFIVPGMQNLSENDLEFM EVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTSSRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILE AYDLKDPNRKSQLWKTIVKSEGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK
Sequences:
>Translated_226_residues MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSNDKSFFIVPGMQNLSENDLEFM EVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTSSRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILE AYDLKDPNRKSQLWKTIVKSEGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK >Mature_226_residues MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSNDKSFFIVPGMQNLSENDLEFM EVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTSSRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILE AYDLKDPNRKSQLWKTIVKSEGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25394; Mature: 25394
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSND CCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCC KSFFIVPGMQNLSENDLEFMEVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTS CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCC SRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILEAYDLKDPNRKSQLWKTIVKS CEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHC EGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECC >Mature Secondary Structure MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSND CCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCC KSFFIVPGMQNLSENDLEFMEVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTS CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCC SRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILEAYDLKDPNRKSQLWKTIVKS CEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHC EGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA