Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673983

Identifier: 21673983

GI number: 21673983

Start: 1088159

End: 1088839

Strand: Direct

Name: 21673983

Synonym: CT1157

Alternate gene names: NA

Gene position: 1088159-1088839 (Clockwise)

Preceding gene: 21673982

Following gene: 21673984

Centisome position: 50.5

GC content: 40.38

Gene sequence:

>681_bases
ATGAACAGAATCAAAGTTAGTGGATTATTTCTAATCTTTCTTGTTATAACGGCTACGCTACAATTAAGTGGATGTGCAAC
TGTGCCATCAACACCTACTGATCCGAGAATGTTGGGATATGATGAAAGGGTCGAGGTAACGGTACAGGCGCTAGCTGCTC
CTGATGCCCCATCAAATGATAAGAGTTTTTTCATAGTACCAGGAATGCAGAATCTCAGCGAAAATGATCTTGAATTTATG
GAGGTTTCCAGATACATTACAAACGCGCTATCCAAAAAAGGTTATATCCGCGCTAACAGCGTAAAGTCCGCAGCTATTCT
TATCCGTTTGAGCTATGGTATTGGAGATCCTCAAACAAGCTCCCGGACCGTTGAAATTTCCCCAGGGTATAGCTACCCTG
TCGGATGGATGTGGTTTACGCAACCACCCCAAACTCAAACAGTTAAAGAAACAACCTACCAAAGAAATTTGATATTAGAA
GCGTATGACTTAAAAGATCCAAACAGAAAATCACAACTCTGGAAAACAATCGTGAAAAGCGAAGGTTCCTATTCTGATCT
AAATCGTATTCTTGCGTATATGATTGCAGCTTCATCTGAATATTTTGGCACAAATACAGGCAGGCAGATAGATTTAACTA
TTTATGGGCACGACCCAAGACTACTGGATATTTGGAAATAA

Upstream 100 bases:

>100_bases
GTTTCGTTACAGCTCAATGTTGATGAGCGTCACATAAAACGAGATATGAAGAAACGAACTAATAACTTGTTATCATCAGA
ACAGATTATAAGGAGGCAAT

Downstream 100 bases:

>100_bases
GGAAATCAGATAACAAGATCAATACAGCCGATCGCTACGCTCCGGCTGATTTAATAGTTAGTTAGCAGAAAAAAAGATGA
GCAAGAAGATGATTTGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSNDKSFFIVPGMQNLSENDLEFM
EVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTSSRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILE
AYDLKDPNRKSQLWKTIVKSEGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK

Sequences:

>Translated_226_residues
MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSNDKSFFIVPGMQNLSENDLEFM
EVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTSSRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILE
AYDLKDPNRKSQLWKTIVKSEGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK
>Mature_226_residues
MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSNDKSFFIVPGMQNLSENDLEFM
EVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTSSRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILE
AYDLKDPNRKSQLWKTIVKSEGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25394; Mature: 25394

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSND
CCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCC
KSFFIVPGMQNLSENDLEFMEVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTS
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCC
SRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILEAYDLKDPNRKSQLWKTIVKS
CEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHC
EGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECC
>Mature Secondary Structure
MNRIKVSGLFLIFLVITATLQLSGCATVPSTPTDPRMLGYDERVEVTVQALAAPDAPSND
CCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCC
KSFFIVPGMQNLSENDLEFMEVSRYITNALSKKGYIRANSVKSAAILIRLSYGIGDPQTS
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCC
SRTVEISPGYSYPVGWMWFTQPPQTQTVKETTYQRNLILEAYDLKDPNRKSQLWKTIVKS
CEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHC
EGSYSDLNRILAYMIAASSEYFGTNTGRQIDLTIYGHDPRLLDIWK
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA