| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is rsbW
Identifier: 21673815
GI number: 21673815
Start: 934839
End: 935261
Strand: Direct
Name: rsbW
Synonym: CT0987
Alternate gene names: NA
Gene position: 934839-935261 (Clockwise)
Preceding gene: 21673811
Following gene: 21673816
Centisome position: 43.38
GC content: 52.96
Gene sequence:
>423_bases ATGAGCTATTACTGGTTGTCGCTGCCCTCGATGATCGAAGAGATTCCCAGGCTTCGTCATTTTCTGGGCGTTGTTGCGCG CATTGAGGGATACCGCGACGCATTCATCCTGGACCTCGAATTAACCGTCCATGAGGCTTTTGTTAACGCTGTCAGGCATG GTAACCATGGCAACGCCGCATTTCCGGTCACCATAACGCTTGAGGCTGGAGACATTGATGGTGAGCGGTTTCTGGAGGTT CGAGTCCAGGACTGTGGAGAAGGATTTCACCCGGAGCGCGCCATCGCCGTGATCTGTTCAAGCCGAAACGCTACTGCTTT TGGCGGGCGAGGCTTGTTGTTTGTAGACCGGTTTGTCGAAAGCTACAGGATCGAACAGGCGTCGGGCGGTTGTGTAGTGG TATTGCGTTATATTCCTTACTAA
Upstream 100 bases:
>100_bases TAAAAAAATAAAGTCTTGTTGCGGGTTCGGAGTTTGCTCTCATCGAGGGAACGCGGTACCTTGCAATCAGGCTTTTTCAT GATGTAGCGCTCTGAGTGCT
Downstream 100 bases:
>100_bases TCAATAACGAATAATTGTTTAACCTTTTAACGATCTGCTGACCATGTATCTTTCCCGCAGTGCCGAATGGAGCGCCCTCG AGTCACACTATCAGGATATC
Product: anti-sigma factor
Products: NA
Alternate protein names: Anti-Sigma Regulatory Factor
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSYYWLSLPSMIEEIPRLRHFLGVVARIEGYRDAFILDLELTVHEAFVNAVRHGNHGNAAFPVTITLEAGDIDGERFLEV RVQDCGEGFHPERAIAVICSSRNATAFGGRGLLFVDRFVESYRIEQASGGCVVVLRYIPY
Sequences:
>Translated_140_residues MSYYWLSLPSMIEEIPRLRHFLGVVARIEGYRDAFILDLELTVHEAFVNAVRHGNHGNAAFPVTITLEAGDIDGERFLEV RVQDCGEGFHPERAIAVICSSRNATAFGGRGLLFVDRFVESYRIEQASGGCVVVLRYIPY >Mature_139_residues SYYWLSLPSMIEEIPRLRHFLGVVARIEGYRDAFILDLELTVHEAFVNAVRHGNHGNAAFPVTITLEAGDIDGERFLEVR VQDCGEGFHPERAIAVICSSRNATAFGGRGLLFVDRFVESYRIEQASGGCVVVLRYIPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15720; Mature: 15589
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYYWLSLPSMIEEIPRLRHFLGVVARIEGYRDAFILDLELTVHEAFVNAVRHGNHGNAA CCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCEE FPVTITLEAGDIDGERFLEVRVQDCGEGFHPERAIAVICSSRNATAFGGRGLLFVDRFVE EEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHH SYRIEQASGGCVVVLRYIPY HHEEECCCCCEEEEEEECCC >Mature Secondary Structure SYYWLSLPSMIEEIPRLRHFLGVVARIEGYRDAFILDLELTVHEAFVNAVRHGNHGNAA CEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCEE FPVTITLEAGDIDGERFLEVRVQDCGEGFHPERAIAVICSSRNATAFGGRGLLFVDRFVE EEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHH SYRIEQASGGCVVVLRYIPY HHEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA