| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yghO [H]
Identifier: 21673811
GI number: 21673811
Start: 930777
End: 931994
Strand: Direct
Name: yghO [H]
Synonym: CT0983
Alternate gene names: 21673811
Gene position: 930777-931994 (Clockwise)
Preceding gene: 21673810
Following gene: 21673815
Centisome position: 43.19
GC content: 52.55
Gene sequence:
>1218_bases ATGATCCACATTGGATGGCAGGAGTCCATTTTCGTAACGGGATTCCTGCTGTTTAATCCACGTCACTACCCTATTCAAAC CATCATGAGCATCGAAATCAGGCGGGTCAATACCAGCCGTGAGCGCAAACAGTTCATCAAGTTTGCGTGGAAGGTGTACA GAAAAGATCCTGAGCTGAACAGAAACTGGGTGCCACCGGTGATTTCGGACTACATGAAAACCCTCGATACCGAGCGCTAT CCACTCTATGAGCATGCCGATCTGGCGATGTTCACTGCCTGGAAGGATGGTGTCATGGTTGGTACGATTGCTGCAATCCA CAACCACCGGCATAACGAGGTTCATCAGGACAAGGTTGGATTCTGGGGTTTTTTCGAGTGTGTGAACGACCAGAAAGTGG CCGATGCTTTGTTTGAAGCGGCTGCCATGTGGTTGAAAAGCAAAGGTCTTGATACGATGCGGGGGCCCGTAAGCCCGTCC ATGAACGACCAGTGCGGCATGCTTACCAAAGGCTACGACAGCCCGCCGGTGTTTCTGATGCTTTACAACCCGCCTTACTA CAACGACTTGTGCCTGAACAGCGGCCATAAGATCGGTCAGGAGCTTCTTGCCTGGTATATCGATCAGAAGATGATCGACA TCGGTCGCCTGAGCCGCATCGCCCAGCATGTGCTGAAGCGCGAAGGTCTGACCGTTCGCGACATGGACATGAAGAAGTAT GATAGCGAAGTGGAGAAGATCAGGGAGATTTACAACAAGGCGTGGGAGAAGAACTGGGGCTTCGTGCCGATGACCGACAA GGAGTTCGAATTCATGGCCAAGAGCCTCAAGCCGCTGGCCGACCCGCACTTCATCTATTTCGTCGAGGACAAAAACGGCA AGGCCATCGGCTTTTCGCTGACGCTGCCCGACATCAACCAGGCGCTCAAACACGTCAACGGCAATCCCTTCACGCCGTGG GGTCTGGTTAAATACCTCTGGTACAAACGTAACATTTCGATGTTCCGCACCATCACGATGGGCGTGCTGCCGGAGTATCG CAACAAGGGGATCGACAGCATCATGAATGCGCGAATTTCTGAATATGGCGGAAAGTACGGTCTGTTCGCCAGCGAGATGA GCTGGGTGCTCAAGTCCAACGAAGCGATGAGCAAGCTCGCCAAAGTGATCGGTGGTGTTCCGTACAAGGAGTACGTGATC TATGAAAAGGCGATCTGA
Upstream 100 bases:
>100_bases GATTCGTTGGATTAAACCTTTTCCAGGCAGCGTTTACCGGCTTCTGCCCGCTTGCAAAGATCCTTAAGGCTGCGGGTGTG AAACCGGGGCATGCATTTGA
Downstream 100 bases:
>100_bases AGTTTTTCGGAACAGAACAGCTGGTATAGCTATAAACGACGAAGGGGCCCAGATGAGCCCCTTTGTCGTTTTTGTCTTTT AACCTAACCAACCTTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MIHIGWQESIFVTGFLLFNPRHYPIQTIMSIEIRRVNTSRERKQFIKFAWKVYRKDPELNRNWVPPVISDYMKTLDTERY PLYEHADLAMFTAWKDGVMVGTIAAIHNHRHNEVHQDKVGFWGFFECVNDQKVADALFEAAAMWLKSKGLDTMRGPVSPS MNDQCGMLTKGYDSPPVFLMLYNPPYYNDLCLNSGHKIGQELLAWYIDQKMIDIGRLSRIAQHVLKREGLTVRDMDMKKY DSEVEKIREIYNKAWEKNWGFVPMTDKEFEFMAKSLKPLADPHFIYFVEDKNGKAIGFSLTLPDINQALKHVNGNPFTPW GLVKYLWYKRNISMFRTITMGVLPEYRNKGIDSIMNARISEYGGKYGLFASEMSWVLKSNEAMSKLAKVIGGVPYKEYVI YEKAI
Sequences:
>Translated_405_residues MIHIGWQESIFVTGFLLFNPRHYPIQTIMSIEIRRVNTSRERKQFIKFAWKVYRKDPELNRNWVPPVISDYMKTLDTERY PLYEHADLAMFTAWKDGVMVGTIAAIHNHRHNEVHQDKVGFWGFFECVNDQKVADALFEAAAMWLKSKGLDTMRGPVSPS MNDQCGMLTKGYDSPPVFLMLYNPPYYNDLCLNSGHKIGQELLAWYIDQKMIDIGRLSRIAQHVLKREGLTVRDMDMKKY DSEVEKIREIYNKAWEKNWGFVPMTDKEFEFMAKSLKPLADPHFIYFVEDKNGKAIGFSLTLPDINQALKHVNGNPFTPW GLVKYLWYKRNISMFRTITMGVLPEYRNKGIDSIMNARISEYGGKYGLFASEMSWVLKSNEAMSKLAKVIGGVPYKEYVI YEKAI >Mature_405_residues MIHIGWQESIFVTGFLLFNPRHYPIQTIMSIEIRRVNTSRERKQFIKFAWKVYRKDPELNRNWVPPVISDYMKTLDTERY PLYEHADLAMFTAWKDGVMVGTIAAIHNHRHNEVHQDKVGFWGFFECVNDQKVADALFEAAAMWLKSKGLDTMRGPVSPS MNDQCGMLTKGYDSPPVFLMLYNPPYYNDLCLNSGHKIGQELLAWYIDQKMIDIGRLSRIAQHVLKREGLTVRDMDMKKY DSEVEKIREIYNKAWEKNWGFVPMTDKEFEFMAKSLKPLADPHFIYFVEDKNGKAIGFSLTLPDINQALKHVNGNPFTPW GLVKYLWYKRNISMFRTITMGVLPEYRNKGIDSIMNARISEYGGKYGLFASEMSWVLKSNEAMSKLAKVIGGVPYKEYVI YEKAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47172; Mature: 47172
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHIGWQESIFVTGFLLFNPRHYPIQTIMSIEIRRVNTSRERKQFIKFAWKVYRKDPELN CEECCCCCCEEEEEEEEECCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC RNWVPPVISDYMKTLDTERYPLYEHADLAMFTAWKDGVMVGTIAAIHNHRHNEVHQDKVG CCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCC FWGFFECVNDQKVADALFEAAAMWLKSKGLDTMRGPVSPSMNDQCGMLTKGYDSPPVFLM HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEE LYNPPYYNDLCLNSGHKIGQELLAWYIDQKMIDIGRLSRIAQHVLKREGLTVRDMDMKKY EECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHH DSEVEKIREIYNKAWEKNWGFVPMTDKEFEFMAKSLKPLADPHFIYFVEDKNGKAIGFSL HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEE TLPDINQALKHVNGNPFTPWGLVKYLWYKRNISMFRTITMGVLPEYRNKGIDSIMNARIS ECHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHH EYGGKYGLFASEMSWVLKSNEAMSKLAKVIGGVPYKEYVIYEKAI HCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHEEEEECCC >Mature Secondary Structure MIHIGWQESIFVTGFLLFNPRHYPIQTIMSIEIRRVNTSRERKQFIKFAWKVYRKDPELN CEECCCCCCEEEEEEEEECCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC RNWVPPVISDYMKTLDTERYPLYEHADLAMFTAWKDGVMVGTIAAIHNHRHNEVHQDKVG CCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCC FWGFFECVNDQKVADALFEAAAMWLKSKGLDTMRGPVSPSMNDQCGMLTKGYDSPPVFLM HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEE LYNPPYYNDLCLNSGHKIGQELLAWYIDQKMIDIGRLSRIAQHVLKREGLTVRDMDMKKY EECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHH DSEVEKIREIYNKAWEKNWGFVPMTDKEFEFMAKSLKPLADPHFIYFVEDKNGKAIGFSL HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEE TLPDINQALKHVNGNPFTPWGLVKYLWYKRNISMFRTITMGVLPEYRNKGIDSIMNARIS ECHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHH EYGGKYGLFASEMSWVLKSNEAMSKLAKVIGGVPYKEYVIYEKAI HCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]